isolatePeaks: isolatePeaks

Description Usage Arguments Value Examples

View source: R/isolatePeaks.R

Description

This function is designed to handle the isolation of TIC peak regions to throw into AutoTuner.

Usage

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isolatePeaks(Autotuner, returned_peaks, signals)

Arguments

Autotuner

An Autotuner object. Ideally generated right after signal processing peak identification is complete.

returned_peaks

A numerical value representing the number of peaks that are to be returned to the user for downstream parameter optimization.

signals

A list of list containing data from sliding window analysis.

Value

Returns an Autotuner object with selected TIC regions.

Examples

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Autotuner <- readRDS(system.file("extdata/Autotuner.rds",
package="Autotuner"))
lag <- 25
threshold<- 3.1
influence <- 0.1
signals <- lapply(getAutoIntensity(Autotuner), ThresholdingAlgo,
lag, threshold, influence)
isolatePeaks(Autotuner, returned_peaks = 10, signals)

crmclean/Autotuner documentation built on Jan. 23, 2021, 1:43 a.m.