supermatrix_SF: Concatenate files based on a given threshold (missing data)
In cromanpa94/rPHYLOTA: Update Phylota Clusters
Description
Usage
Arguments
Author(s)
Examples
Description
This concatenates fasta files based on a given threshold. It read all fasta files within the working directory that matches matching a given pattern (e.g. Cluster)
NOTE: THIS FUNCTION WAS DIRECTLY MODIFIED FROM evobiR PACKAGE! I'M NOT THE ORIGINAL AUTHOR (ASK HEATH BLACKMON FOR FURTHER DETAILS).
Usage
1
supermatrix_SF(threshold, pattern)
Arguments
pattern
Common pattern for every target sequence files (e.g. Cluster)
Author(s)
Cristian Roman-Palacios
Examples
1
2
3
4
## Not run:
supermatrix_SF(threshold=0.2, pattern="Cluster")
## End(Not run)
cromanpa94/rPHYLOTA documentation built on Nov. 4, 2019, 9:18 a.m.
R Package Documentation
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Description Usage Arguments Author(s) Examples
Description
This concatenates fasta files based on a given threshold. It read all fasta files within the working directory that matches matching a given pattern (e.g. Cluster)
NOTE: THIS FUNCTION WAS DIRECTLY MODIFIED FROM evobiR PACKAGE! I'M NOT THE ORIGINAL AUTHOR (ASK HEATH BLACKMON FOR FURTHER DETAILS).
Usage
1 | supermatrix_SF(threshold, pattern)
|
Arguments
pattern |
Common pattern for every target sequence files (e.g. Cluster) |
Author(s)
Cristian Roman-Palacios
Examples
1 2 3 4 | ## Not run:
supermatrix_SF(threshold=0.2, pattern="Cluster")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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