API for crukci-bioinformatics/rascal
Shiny app and functions for scaling relative copy number data to absolute values
| Global functions | |
|---|---|
| absolute_copy_number_distance | Man page Source code |
| absolute_copy_number_distance_grid | Man page Source code |
| absolute_copy_number_distance_heatmap | Man page Source code |
| absolute_copy_number_scaling_factor | Source code |
| absolute_to_relative_copy_number | Man page Source code |
| chromosome_copy_number_plot | Man page Source code |
| chromosome_lengths | Man page Source code |
| copy_number | Man page |
| copy_number_density | Man page Source code |
| copy_number_density_plot | Man page Source code |
| copy_number_maxima | Man page Source code |
| copy_number_segments | Man page Source code |
| distance_heatmap | Man page Source code |
| find_best_fit_solutions | Man page Source code |
| find_minimum | Man page Source code |
| genes | Man page |
| genome_copy_number_plot | Man page Source code |
| is_acceptable_ploidy_and_cellularity | Man page Source code |
| relative_to_absolute_copy_number | Man page Source code |
| start_shiny_app | Man page Source code |
| tumour_fraction | Man page Source code |
