Files in csbl-usp/mdp
Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/data.R
R/mdp.R
README.md
data/example_data.rda
data/example_pheno.rda
data/sample_data.rda
inst/NEWS.txt
inst/extdata/ReactomePathways.gmt
man/compute_gene_score.Rd
man/compute_perturbed_genes.Rd
man/compute_sample_scores.Rd
man/compute_zscore.Rd
man/example_data.Rd
man/example_pheno.Rd
man/mdp.Rd
man/pathway_summary.Rd
man/sample_data.Rd
man/sample_plot.Rd
mdp.Rproj
tests/testthat.R
tests/testthat/test-compute_gene_score.R
tests/testthat/test-mdp-2.R
tests/testthat/test-mdp.R
tests/testthat/test-sample_plot.R
tests/testthat/test-zscore.R
vignettes/my-vignette.Rmd
vignettes/my-vignette.html
