Description Usage Arguments Details Value See Also Examples
Searches and counts feedforward loops for all nodes/edges in a network or in a set of networks.
1 | findFFLs(networks)
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networks |
A network or a set of networks used for FFLs search |
This function searches feedforward loops (FFLs) in a specific network or in a set of networks. For each network, the returned results are stored in two corresponding data frames of node/edge attributes. Each data frame has one column for node/edge identifiers, and four columns contain corresponding number of all FFL motifs and number of FFL motifs with three different roles A, B and C. Another data frame of the network object, "network" data frame, contains total numbers of FFLs and coherent/incoherent FFLs in the network.
The updated network objects including number of FFL motifs for each node/edge.
findFBLs
, calCentrality
, calSensitivity
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