Files in csetraynor/survbayes2
Bayesian Survival Models (survbayes2)
.Rbuildignore
.gitignore
ChemoEffect.pdf
DESCRIPTION
HierarchicalModel.pdf
Hormone.pdf
HormoneRadioInteraction.pdf
HormoneSurgeryInteraction.pdf
LICENSE
MC_Results.pdf
NAMESPACE
R/bayes_GAMM.R
R/cindex.R
R/data.R
R/gen_stan_data.R
R/link.R
R/misc.R
R/mod_coxfit.R
R/plot_prepare.R
R/pred_surv.R
R/tdbrier.R
README.md
SCP_R.submit
Surgery.pdf
TreatEffectInteraction.pdf
counterfactual.pdf
counterfactual_kras_surgery.pdf
counterfactual_lef1_surgery.pdf
data-raw/loadCBioPortalData.R
data-raw/preProcess_gene_cna.R
data/bric_data_clinical.rda
data/ic2_lasso_gwt.rda
data/ic2surv.rda
docs/BayesianLasso.R
docs/CoxLasso.R
docs/Cumulative Hazard Plot.R
docs/GPs.R
docs/HierarchicaModelForHR.R
docs/IntroGAMS.R
docs/Model_Comparision_back_up.R
docs/cna_matrix.R
docs/vignette_brier.R
docs/vignette_cna.R
docs/working_in_gamm.R
docs/working_project.R
docs/working_tdbrier.R
man/gen_new.frame.Rd
man/gen_stan_dat.Rd
man/gen_stan_surv.Rd
man/get_bs2.Rd
man/get_ci2.Rd
man/get_cindex.Rd
man/get_plot.frame.Rd
man/get_plot_new_frame.Rd
man/ic2surv.Rd
man/link.surv.Rd
man/mod_coxfit.Rd
man/plot_km.Rd
man/post_surv.Rd
man/pred_sbm.Rd
man/pred_surv.Rd
man/str_strata.Rd
man/surv_pred_bgam.Rd
man/tdbrier.Rd
pbs_intclust_1.txt
pbs_intclust_10.txt
pbs_intclust_11.txt
pbs_intclust_2.txt
pbs_intclust_3.txt
pbs_intclust_4.txt
pbs_intclust_5.txt
pbs_intclust_6.txt
pbs_intclust_7.txt
pbs_intclust_8.txt
pbs_intclust_9.txt
survbayes2.Rproj
tmp/gen_stan_data.R
tmp/make_masterscripts.R
tmp/make_script.R
tmp/masterscript.txt
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_1.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_10.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_100.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_11.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_12.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_13.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_14.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_15.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_16.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_17.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_18.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_19.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_2.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_20.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_21.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_22.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_23.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_24.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_25.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_26.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_27.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_28.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_29.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_3.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_30.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_31.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_32.RDS
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tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_4.RDS
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tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_7.RDS
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tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_8.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_80.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_81.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_82.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_83.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_84.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_85.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_86.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_87.RDS
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tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_89.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_9.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_90.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_91.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_92.RDS
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tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_96.RDS
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tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_98.RDS
tmp/modelfiles_clust1/bayes_model_clinical_iclust_1_sample_99.RDS
tmp/modelfiles_clust1/preProcTrain_clin1.RDS
tmp/modelfiles_clust1/preProcTrain_clin10.RDS
tmp/modelfiles_clust1/preProcTrain_clin100.RDS
tmp/modelfiles_clust1/preProcTrain_clin11.RDS
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tmp/modelfiles_clust1/preProcTrain_clin99.RDS
tmp/parallel.R
tmp/parallel_test.R
tmp/serial_R_backup
tmp/serial_R_submit.pbs
tmp/submitmaster.txt
vignettes/Model_Comparision.R
vignettes/parallel.R
vignettes/parallel_icluster.R
vignettes/parallle_icluster_genomic.R
vignettes/run_SCP.R
vignettes/serial_R_submit.pbs
vignettes/vignette_GAMM.R
vignettes/vignette_bgamair.R
