Man pages for cshukla/oligoGames
Analyze data from massively parallel reporter assays
| bumphunt | Detect and score candidate regions |
| designOligoPool | Design oligo pool by tiling a set of sequences |
| DRfinder | Perform inference to detect differential regions in oligo... |
| mapToBarcodes | Map case and control fastq files to unique oligo barcodes and... |
| modelNucCounts | Model nucleotide resolution counts from oligo counts |
| normCounts | A function to normalize counts |
| regionFinder | Break up nucleotide level signal into candidate regions and... |
| smoother | A smoother function for coefficient values |
