bumphunt | Detect and score candidate regions |
designOligoPool | Design oligo pool by tiling a set of sequences |
DRfinder | Perform inference to detect differential regions in oligo... |
mapToBarcodes | Map case and control fastq files to unique oligo barcodes and... |
modelNucCounts | Model nucleotide resolution counts from oligo counts |
normCounts | A function to normalize counts |
regionFinder | Break up nucleotide level signal into candidate regions and... |
smoother | A smoother function for coefficient values |
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