toxicityOptions: Toxicity Options class

In csmoxford/robustToxicities: Toxicity tables

Description

An object containing all the key options for creating the toxicity tables. This is a slot in the robustToxicitiesClass. This class can be generated using DefaultToxicityOptions() and updated manually.

Slots

displayNotes

A logical value used by robustToxicities to determine whether or not to print notes

toxTable_cycle_tabulationMethod

One of "worst" or "all" determining if all toxicity changes are counted or only the worst reported grade in a time period

toxTable_tabulationPercent

A logical value used to determine if toxicity tables should report counts (FALSE, default) or percentages (TRUE)

toxTable_tabulationZeros

A logical value used to determine if zeros should be included, default TRUE

toxTable_cumulativeGrades

A logical value used to determine whether toxicity grades should be reported cumulatively or not, default TRUE

toxTable_discardToxAtStudyEntry

A logical value used to determine if toxicities reported at baseline should be reported or not, default FALSE

toxTable_mergeGrades

Grades to merge in the tables. Columns are seperated by "|" and merged values are seperated by ",". "n"

toxTable_cycle_toxicityOrder

What order should the data be returned in. "c" ordered by categories and then adverse events. "a" ordered by adverse events. "n" ordered by number of adverse events. The n option can be followed by a number to denote the minimum grade to use for sorting. e.g. "n3" will order by grades 3-5 and then 1-5 for ties within grades 3-5.

csmoxford/robustToxicities documentation built on May 14, 2019, 12:24 p.m.