dot-generateData: Generate data

In csoneson/ConfoundingExplorer: Confounding Explorer

Generate data

Description

Generate data

Usage

.generateData(
  nb1c1,
  nb1c2,
  nb2c1,
  nb2c2,
  fraccond,
  fracbatch,
  fracunknown,
  condeffect,
  batcheffect,
  unknowneffect,
  unknowntype,
  analysisapproach,
  nvar,
  seed
)

Arguments

nb1c1, nb1c2, nb2c1, nb2c2	Number of samples in the respective groups (batch 1/2, condition 1/2)
fraccond, fracbatch	Fraction of variables affected by condition and batch, respectively
condeffect, batcheffect	Condition and batch effect size, respectively
analysisapproach	Type of statistical model to fit
nvar	Number of variables
seed	Random seed

Value

A list with three elements: the simulated data matrix (m), the results of the statistical test (res) and the sample annotation table (annot).

Author(s)

Charlotte Soneson

csoneson/ConfoundingExplorer documentation built on March 30, 2024, 6:17 p.m.