csoneson/ConfoundingExplorer: Confounding Explorer

This package provides a simple interactive application for investigating the effect of confounding between a signal of interest and a batch effect. It uses simulated data with user-specified effect sizes for both batch and condition effects. The user can also specify the number of samples in each condition and batch, and thereby the degree of confounding.

Getting started

Package details

Bioconductor views BatchEffect ExperimentalDesign MultipleComparison Regression
LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
csoneson/ConfoundingExplorer documentation built on June 29, 2023, 10:52 p.m.