clustering_summary_v2: Clustering summaries

In csoneson/DuoClustering2018: Data, Clustering Results and Visualization Functions From Duò et al (2018)

Clustering summaries

Description

Clustering results for the performance evaluation of clustering methods for scRNA-seq data, corresponding to v2 of Duò et al. (2018).

Usage

clustering_summary_filteredExpr10_Koh_v2(metadata = FALSE)

Arguments

metadata

Logical, whether only metadata should be returned

Details

These objects contain clustering results from the performance evaluation of clustering methods for scRNA-seq data. The clustering results are provided as a data.frame object containing 10 variables (columns) named dataset, method, cell, run, k, resolution, cluster, trueclass, est_k and elapsed. For further information see Duò et al. (2018).

Value

Returns a data.frame.

References

Duò A, Robinson MD. and Soneson C. (2018). A systematic performance evaluation of clustering methods for single-cell RNA-seq data. F1000Res., 7:1141.

Examples

clustering_summary_filteredExpr10_Koh_v2()

csoneson/DuoClustering2018 documentation built on July 4, 2023, 2:23 p.m.