Files in csoneson/jcc
Calculate JCC Scores

.github/workflows/R-CMD-check.yaml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/calculateJCCScores.R R/combineCoverages.R R/fitAlpineBiasModel.R R/plotGeneSummary.R R/predictTxCoverage.R R/scaleTxCoverages.R README.md
inst/extdata/Homo_sapiens.GRCh38.90.chr22.gtf.gz
inst/extdata/quant.sub.rds
inst/extdata/reads.chr22.bam
inst/extdata/reads.chr22.bam.bai
inst/extdata/reads.chr22.bw
inst/extdata/sub.SJ.out.tab
inst/extdata/tx2gene.sub.rds
man/calculateJCCScores.Rd man/combineCoverages.Rd man/fitAlpineBiasModel.Rd man/gthr.Rd man/junctionScore.Rd man/plotGeneSummary.Rd man/predictTxCoverage.Rd man/scaleTxCoverages.Rd man/scaledCoverage.Rd tests/testthat.R tests/testthat/test-jcc-calc.R vignettes/JCCscore.Rmd
vignettes/jcc.bib
vignettes/study_design.png
csoneson/jcc documentation built on July 18, 2024, 2:29 a.m.