Description Usage Arguments Value Note Author(s) References See Also Examples

View source: R/plot.variogram.R

Produces simple plots of `varigram`

objects (semi-variance vs. time lag) and model semi-variance functions, with approximate confidence intervals around the semi-variance estimates.

1 2 3 4 5 6 |

`x` |
A |

`CTMM` |
A |

`level` |
Confidence level of confidence bands (95% default CIs). Can be an array. |

`units` |
Convert axes to natural units. |

`fraction` |
The proportion of the variogram object, |

`col` |
Color for the empirical variogram. Can be an array. |

`col.CTMM` |
Color for the model. Can be an array. |

`xlim` |
Range of lags to plot (in SI units). |

`ylim` |
Range of semi-variance to plot (in SI units). |

`...` |
Additional |

Returns a plot of semi-variance vs. time lag, with the empirical variogram in blue and the `ctmm`

semi-variance function in red if specified. `zoom`

includes a log-scale zoom slider to manipulate `fraction`

.

The errors of the empirical variogram are correlated. Smooth trends are not necessarily significant.

J. M. Calabrese and C. H. Fleming

C. H. Fleming, J. M. Calabrese, T. Mueller, K.A. Olson, P. Leimgruber, W. F. Fagan. From fine-scale foraging to home ranges: A semi-variance approach to identifying movement modes across spatiotemporal scales. The American Naturalist, 183:5, E154-E167 (2014).

`correlogram`

, `ctmm.fit`

, `plot`

, `variogram`

, `variogram.fit`

.

1 2 3 4 5 6 7 8 9 10 11 12 |

ctmm-initiative/ctmm documentation built on Nov. 17, 2018, 2:22 p.m.

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.