create_ncbi_basic_tax_dataframe: Create a minimal dataframe with taxonomic information...
In currocam/FascinRSCA: R and Python code for SCA with fascin protein
View source: R/create_ncbi_basic_tax_dataframe.R
create_ncbi_basic_tax_dataframe R Documentation
Create a minimal dataframe with taxonomic information extracted from NCBI.
Description
Create a minimal dataframe with taxonomic information extracted from NCBI.
Usage
create_ncbi_basic_tax_dataframe(
taxid,
rank_vc = c("superkingdom", "kingdom", "phylum", "subphylum", "superclass", "class",
"suborder", "order", "family", "subfamily", "genus", "species")
)
Arguments
taxid
A character vector containing Uniprot taxonomy id
rank_vc
A character vector containing Taxonomic rank columns
Value
Dataframe
currocam/FascinRSCA documentation built on March 21, 2022, 6:29 a.m.
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View source: R/create_ncbi_basic_tax_dataframe.R
| create_ncbi_basic_tax_dataframe | R Documentation |
Create a minimal dataframe with taxonomic information extracted from NCBI.
Description
Create a minimal dataframe with taxonomic information extracted from NCBI.
Usage
create_ncbi_basic_tax_dataframe(
taxid,
rank_vc = c("superkingdom", "kingdom", "phylum", "subphylum", "superclass", "class",
"suborder", "order", "family", "subfamily", "genus", "species")
)
Arguments
taxid |
A character vector containing Uniprot taxonomy id |
rank_vc |
A character vector containing Taxonomic rank columns |
Value
Dataframe
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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