Methods for Image-Based Cell Profiling

aggregate | Aggregate data based on given grouping. |

correlation_threshold | Remove redundant variables. |

count_na_rows | Count the number of 'NA's per variable. |

covariance | Compute covariance matrix and vectorize. |

drop_na_columns | Remove variables with NA values. |

drop_na_rows | Drop rows that are 'NA' in all variables. |

extract_subpopulations | Extract subpopulations. |

generalized_log | Generalized log transform data. |

generate_component_matrix | A sparse matrix for sparse random projection. |

normalize | Normalize observation variables. |

replicate_correlation | Measure replicate correlation of variables. |

sparse_random_projection | Reduce the dimensionality of a population using sparse random... |

svd_entropy | Feature importance based on data entropy. |

transform | Transform observation variables. |

variable_importance | Measure variable importance. |

variable_select | Select observation variables. |

variance_threshold | Remove variables with near-zero variance. |

whiten | Whiten data. |

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