JASPAR2020-class: JASPAR2020 object class

In da-bar/JASPAR: Data package for JASPAR database (version 2020)

Description

The JASPAR2020 object class is a thin class for storing the path of JASPAR2020 style SQLite file.

Slots

db

Object of class "character" a character string of the path of SQLite file.

Author(s)

Damir Baranasic

Examples

library(TFBSTools)
opts <- list()
opts[["species"]] <- 9606
opts[["type"]] <- "SELEX"
opts[["all_versions"]] <- TRUE
PFMatrixList <- getMatrixSet(JASPAR2020, opts)

opts2 <- list()
opts2[["type"]] <- "SELEX"
PFMatrixList2 <- getMatrixSet(JASPAR2020, opts2)

da-bar/JASPAR documentation built on May 3, 2020, 4:58 p.m.