exportUCSC: Generates a UCSC fromated bed file
In daewoooo/YeastSCElocatoR: Find SCEs in haploid Strand-seq data
Description
Usage
Arguments
Author(s)
Description
Write a bedfile from yeastSCElocatoR files for upload into a UCSC Genome browser
Usage
1
2
Arguments
index
is used to index the bedfile(s)
outputDirectory
is location to write bedfile(s)
fragments
A GRanges object with strand and mapq metadata, such as that generated by bam2GRanges
segments
A data.frame object with localized regions of 0 and 1 or mixture 0,1
recombs
A data.frame object with coordinates of every state transition
Author(s)
Ashley Sanders, David Porubsky
daewoooo/YeastSCElocatoR documentation built on May 14, 2019, 3:25 p.m.
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Description Usage Arguments Author(s)
Description
Write a bedfile from yeastSCElocatoR files for upload into a UCSC Genome browser
Usage
1 2 |
Arguments
index |
is used to index the bedfile(s) |
outputDirectory |
is location to write bedfile(s) |
fragments |
A |
segments |
A data.frame object with localized regions of 0 and 1 or mixture 0,1 |
recombs |
A data.frame object with coordinates of every state transition |
Author(s)
Ashley Sanders, David Porubsky
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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