example_bams: Example BAM-files
In daewoooo/strandseqExampleData: Strand-seq data for demonstration purposes
Description
Format
Details
Source
References
Description
A set of BAM-files for demonstration purposes of the functions in package breakpointR.
Format
A BAM files with aligned reads with one read per line.
Details
BAM files contain single-end reads aligned to GRCh38 reference genome.
Read sequences and quality values have been removed in order to reduce the file size.
Source
A lyphoblastoid cell line of Puerto Rican origin (HG00731). Raw reads were aligned to the GRCh38/hg38 reference assembly. The file has been downsampled to 20% of the coverage to reduce the file size.
References
https://www.biorxiv.org/content/early/2017/09/23/193144
daewoooo/strandseqExampleData documentation built on May 22, 2019, 11:51 p.m.
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Description Format Details Source References
Description
A set of BAM-files for demonstration purposes of the functions in package breakpointR.
Format
A BAM files with aligned reads with one read per line.
Details
BAM files contain single-end reads aligned to GRCh38 reference genome.
Read sequences and quality values have been removed in order to reduce the file size.
Source
A lyphoblastoid cell line of Puerto Rican origin (HG00731). Raw reads were aligned to the GRCh38/hg38 reference assembly. The file has been downsampled to 20% of the coverage to reduce the file size.
References
https://www.biorxiv.org/content/early/2017/09/23/193144
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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