get_cancer_studies: Retrieve the List of Cancer Studies Available at cbioportal.

In dami82/TCGAretriever: Retrieve Genomic and Clinical Data from CBioPortal Including TCGA Data

Retrieve the List of Cancer Studies Available at cbioportal.

Description

Retrieve information about the studies or datasets available at cbioportal.org. Information include a 'studyId', description, references, and more.

Usage

get_cancer_studies(dryrun = FALSE)

Arguments

dryrun

Logical. If TRUE, all other arguments (if any) are ignored and a representative example is returned as output. No Internet connection is required for executing the operation when 'dryrun' is TRUE.

Value

Data Frame including cancer study information.

Author(s)

Damiano Fantini, [e-mail]

References

https://www.data-pulse.com/dev_site/TCGAretriever/

Examples

# Set `dryrun = FALSE` (default option) in production!
all_studies <- get_cancer_studies(dryrun = TRUE)
utils::head(all_studies)

dami82/TCGAretriever documentation built on Feb. 2, 2024, 12:06 p.m.