Man pages for danielbraas/MetabFUN
This is a collection of functions that I use for metabolomics data analysis

barThis function produces a bar plot using data from function...
bar_plotThis function produces a bar plot using data from function...
data_annotateThis function is searching either the KEGG or HMDB databases...
helloHello, World!
isomerThis function takes in a chemical formula and will return all...
make_AOV_volcanoThis function takes in a data and produces a volcano plot...
make_FCThis function produces a data frame with fractional...
make_INCACreate a tab-delimited file with MDVs and a csv file with FC...
make_INCA_normalizedCreates a csv file with flux estimates relative to a control...
make_labeledThis function produces a data frame with percent labeled...
make_matrixThis function produces a matrix for hierarchical clustering...
make_MIDThis function produces a data frame with mass isotopologue...
make_mzXMLThis function converts .raw files into .mzXML files for...
make_PCAThis function takes in a data matrix and produces a PCA plot...
make_PCA2This function takes in a data matrix and produces a PCA plot...
make_pheatmapThis function takes in a data matrix and produces an...
make_RelAmountsThis function produces a data frame with relative metabolite...
make_volcanoThis function produces a volcano plot using data with two...
mapvaluesThis function uses the mapvalues function from plyr without...
replace_characterThis function takes in a string and either replaces or...
danielbraas/MetabFUN documentation built on Nov. 21, 2017, 10:25 a.m.