average_spectrum: Generating consensus spectra
In daniellyz/MergeION: Merge Scans from Multiple LC-MS/MS Raw Data Files
View source: R/average_spectrum.r
average_spectrum R Documentation
Generating consensus spectra
Description
Internal function that merges a list of normalized spectra that belong to the same ID
Usage
average_spectrum(splist, ppm_window = 10, clean = F)
Arguments
splist
List of extracted spectra. Each spectrum is a data matrix with two columns: m/z and intensity
ppm_window
m/z tolerance window (in ppm) for spectra alignment
clean
Logical. TRUE if peaks not present in all spectra are filtered.
Value
new_spectrum ~ The aligned, (filtered) and averaged consensus spectra: data matrix with two columns (m/z and intensity)
daniellyz/MergeION documentation built on Oct. 19, 2022, 1:56 p.m.
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View source: R/average_spectrum.r
| average_spectrum | R Documentation |
Generating consensus spectra
Description
Internal function that merges a list of normalized spectra that belong to the same ID
Usage
average_spectrum(splist, ppm_window = 10, clean = F)
Arguments
splist |
List of extracted spectra. Each spectrum is a data matrix with two columns: m/z and intensity |
ppm_window |
m/z tolerance window (in ppm) for spectra alignment |
clean |
Logical. TRUE if peaks not present in all spectra are filtered. |
Value
new_spectrum ~ The aligned, (filtered) and averaged consensus spectra: data matrix with two columns (m/z and intensity)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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