readMGF2: Extracting metadata and a list of spectra from mgf file
In daniellyz/MergeION: Merge Scans from Multiple LC-MS/MS Raw Data Files
readMGF2 R Documentation
Extracting metadata and a list of spectra from mgf file
Description
The function extracts a dataframe of metadata and a list of spectra from mgf file or
Usage
readMGF2(con)
Arguments
con
Name of the input library, the file extension must be mgf
Value
sp: List of all extracted spectra. Each spectrum is a data matrix with two columns: m/z and intensity
metadata: Data frame containing metadata of extracted scans. PEPMASS and RT are updated based on actually-detected scans. Following five columns are added: FILENAME, MSLEVEL, TIC, MASS_DEV, SCANNUMBER and SCANS
daniellyz/MergeION documentation built on Oct. 19, 2022, 1:56 p.m.
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| readMGF2 | R Documentation |
Extracting metadata and a list of spectra from mgf file
Description
The function extracts a dataframe of metadata and a list of spectra from mgf file or
Usage
readMGF2(con)
Arguments
con |
Name of the input library, the file extension must be mgf |
Value
sp: List of all extracted spectra. Each spectrum is a data matrix with two columns: m/z and intensity
metadata: Data frame containing metadata of extracted scans. PEPMASS and RT are updated based on actually-detected scans. Following five columns are added: FILENAME, MSLEVEL, TIC, MASS_DEV, SCANNUMBER and SCANS
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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