Man pages for danro9685/SparseSignatures
SparseSignatures
| background | germline replication error |
| background2 | COSMIC replication error |
| cv_example | example of results obtained with the function nmf.LassoCV on... |
| imported_data | example of imported data from Nik-Zainal, Serena, et al.... |
| import.trinucleotides.counts | import.trinucleotides.counts |
| lambdaRangeAlphaEvaluation | lambdaRangeAlphaEvaluation |
| lambdaRangeBetaEvaluation | lambdaRangeBetaEvaluation |
| lambda_range_example | example of results obtained with the function... |
| mutation_categories | trinucleotides mutation categories |
| nmfLasso | nmfLasso |
| nmfLassoBootstrap | nmfLassoBootstrap |
| nmfLassoCV | nmfLassoCV |
| nmf_LassoK_example | example of results obtained with the function nmf.LassoK on... |
| patients | point mutations for 560 breast tumors |
| patients.plot | patients.plot |
| sigAssignmentCV | sigAssignmentCV |
| sigAssignmentEvaluation | sigAssignmentEvaluation |
| sigAssignmentLasso | sigAssignmentLasso |
| signatures.plot | signatures.plot |
| ssm560_reduced | a reduced version of the point mutations for 560 breast... |
| startingBetaEstimation | startingBetaEstimation |
| starting_betas_example | example of results obtained with the function... |
