cancer.ds: A demo microarray dataset from a cancer study
In datapplab/SBGNview.data: Supporting datasets for SBGNview package
Description
Usage
Format
Details
Description
A demo microarray dataset from a cancer study
Usage
1
Format
A SummarizedExperiment object.
Details
This dataset is constructed using the first three columns of data **gse16873.d** in package **pathview** (i.e. columns "DCIS_1","DCIS_2" and "DCIS_3"). the original values were used without additional processing. It is constructed for showing SBGNview's visualization ability, not for data analysis. Each column in the assay table is a pair of cancer-v.s.-control samples. The value of a gene in a column is the log fold change of this gene in the corresponding pair of cancer-v.s.-control samples.
datapplab/SBGNview.data documentation built on March 3, 2021, 7:34 p.m.
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Description Usage Format Details
Description
A demo microarray dataset from a cancer study
Usage
1 |
Format
A SummarizedExperiment object.
Details
This dataset is constructed using the first three columns of data **gse16873.d** in package **pathview** (i.e. columns "DCIS_1","DCIS_2" and "DCIS_3"). the original values were used without additional processing. It is constructed for showing SBGNview's visualization ability, not for data analysis. Each column in the assay table is a pair of cancer-v.s.-control samples. The value of a gene in a column is the log fold change of this gene in the corresponding pair of cancer-v.s.-control samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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