print.SBGNview: Generate image files

In datapplab/SBGNview: "SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways"

Generate image files

Description

A wrapper to run function renderSbgn for all pathways in a SBGNview object and generate image files.

Usage

## S3 method for class 'SBGNview'
print(x, ...)

Arguments

x	A SBGNview class object.
...	Other parameters passed to print.

Value

None

Examples

### Use simulated data. Please see vignettes for more examples.
### Run `browseVignettes(package = "SBGNview")`
data('pathways.info','sbgn.xmls')
SBGNview.obj = SBGNview(simulate.data = TRUE,
                        sbgn.dir = './',
                        input.sbgn = 'P00001',
                        output.file = './test.local.file',
                        output.formats = c('pdf'),
                        min.gene.value = -1,
                        max.gene.value = 1)
 print(SBGNview.obj)

datapplab/SBGNview documentation built on June 20, 2022, 9:55 p.m.