search_phenotype: Search OMIM
In davetang/romim: R wrapper functions for the OMIM API
Description
Usage
Arguments
Examples
View source: R/search_phenotype.R
Description
This function returns OMIM phenotypes given a match of a search term in the text meta field of OMIM phenotype entries.
Recursive apply (rapply) and grep is used because phenotypeMimNumber is not always present in the same XML structure.
Usage
1
search_phenotype(search_term = "noonan syndrome", show_query = FALSE)
Arguments
show_query
Show API query. Default is FALSE.
series
Search term. Default is "noonan syndrome".
Examples
1
search_phenotype(search_term = 'noonan syndrome')
davetang/romim documentation built on May 11, 2021, 8:01 a.m.
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Description Usage Arguments Examples
View source: R/search_phenotype.R
Description
This function returns OMIM phenotypes given a match of a search term in the text meta field of OMIM phenotype entries. Recursive apply (rapply) and grep is used because phenotypeMimNumber is not always present in the same XML structure.
Usage
1 | search_phenotype(search_term = "noonan syndrome", show_query = FALSE)
|
Arguments
show_query |
Show API query. Default is FALSE. |
series |
Search term. Default is "noonan syndrome". |
Examples
1 | search_phenotype(search_term = 'noonan syndrome')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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