tests/testthat/_snaps/heatmaps.md

In david-barnett/microViz: Microbiome Data Analysis and Visualization

cor_heatmap doesn't change:

Code
  p@matrix_param[names(p@matrix_param) != "cell_fun"]
Output
  $row_km
  [1] 1

  $row_km_repeats
  [1] 1

  $row_gap
  [1] 1mm

  $column_km
  [1] 1

  $column_km_repeats
  [1] 1

  $column_gap
  [1] 1mm

  $jitter
  [1] FALSE

  $gp
  $col
  [1] "white"

  $lwd
  [1] 0.5

  $lineheight
  [1] 0.9


  $border
  [1] NA

  $border_gp
  $col
  [1] "black"


  $width
  [1] 5null

  $height
  [1] 30null

Code
  p@matrix_color_mapping
Output
  Continuous color mapping:
  name: pearson 
  default breaks:
  [1] -1.0 -0.5  0.0  0.5  1.0

  colors:
  [1] "#4A6FE3FF" "#6B82E1FF" "#E2E2E2FF" "#DA5F7DFF" "#D33F6AFF"

Code
  p@right_annotation@anno_list
Output
  $prev
  A single annotation with anno_barplot() function
    name: prev 
    position: row 
    no legend
    items: 30 
    width: 15mm 
    height: 1npc 
    this object is  subsettable
    8.94924444444444mm extension on the bottom

  $abund
  A single annotation with anno_boxplot() function
    name: abund 
    position: row 
    no legend
    items: 30 
    width: 15mm 
    height: 1npc 
    this object is  subsettable
    8.94924444444444mm extension on the bottom

Code
  str(p@column_dend_param$obj)
Output
  --[dendrogram w/ 2 branches and 5 members at h = 2.23]
    |--leaf "african" 
    `--[dendrogram w/ 2 branches and 4 members at h = 0.946]
       |--[dendrogram w/ 2 branches and 2 members at h = 0.415]
       |  |--leaf "timepoint" 
       |  `--leaf "timepoint.within.group" 
       `--[dendrogram w/ 2 branches and 2 members at h = 0.738]
          |--leaf "weight" 
          `--leaf "female"

Code
  str(p@row_dend_param$obj)
Output
  --[dendrogram w/ 2 branches and 30 members at h = 1.62]
    |--[dendrogram w/ 2 branches and 6 members at h = 0.301]
    |  |--[dendrogram w/ 2 branches and 2 members at h = 0.0866]
    |  |  |--leaf "Allistipes et rel." 
    |  |  `--leaf "Bacteroides vulgatus et rel." 
    |  `--[dendrogram w/ 2 branches and 4 members at h = 0.223]
    |     |--[dendrogram w/ 2 branches and 3 members at h = 0.139]
    |     |  |--[dendrogram w/ 2 branches and 2 members at h = 0.119]
    |     |  |  |--leaf "Bacteroides plebeius et rel." 
    |     |  |  `--leaf "Tannerella et rel." 
    |     |  `--leaf "Parabacteroides distasonis et rel." 
    |     `--leaf "Bacteroides uniformis et rel." 
    `--[dendrogram w/ 2 branches and 24 members at h = 1.11]
       |--[dendrogram w/ 2 branches and 17 members at h = 0.716]
       |  |--[dendrogram w/ 2 branches and 11 members at h = 0.547]
       |  |  |--[dendrogram w/ 2 branches and 7 members at h = 0.39]
       |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 0.309]
       |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.165]
       |  |  |  |  |  |--leaf "Prevotella tannerae et rel." 
       |  |  |  |  |  `--leaf "Anaerostipes caccae et rel." 
       |  |  |  |  `--leaf "Bryantella formatexigens et rel." 
       |  |  |  `--[dendrogram w/ 2 branches and 4 members at h = 0.213]
       |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0.0816]
       |  |  |     |  |--leaf "Subdoligranulum variable at rel." 
       |  |  |     |  `--leaf "Bifidobacterium" 
       |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 0.132]
       |  |  |        |--leaf "Clostridium symbiosum et rel." 
       |  |  |        `--leaf "Clostridium sphenoides et rel." 
       |  |  `--[dendrogram w/ 2 branches and 4 members at h = 0.352]
       |  |     |--leaf "Bacteroides fragilis et rel." 
       |  |     `--[dendrogram w/ 2 branches and 3 members at h = 0.249]
       |  |        |--[dendrogram w/ 2 branches and 2 members at h = 0.214]
       |  |        |  |--leaf "Lachnospira pectinoschiza et rel." 
       |  |        |  `--leaf "Lachnobacillus bovis et rel." 
       |  |        `--leaf "Akkermansia" 
       |  `--[dendrogram w/ 2 branches and 6 members at h = 0.295]
       |     |--[dendrogram w/ 2 branches and 2 members at h = 0.119]
       |     |  |--leaf "Escherichia coli et rel." 
       |     |  `--leaf "Clostridium cellulosi et rel." 
       |     `--[dendrogram w/ 2 branches and 4 members at h = 0.23]
       |        |--[dendrogram w/ 2 branches and 3 members at h = 0.119]
       |        |  |--leaf "Phascolarctobacterium faecium et rel." 
       |        |  `--[dendrogram w/ 2 branches and 2 members at h = 0.0523]
       |        |     |--leaf "Streptococcus mitis et rel." 
       |        |     `--leaf "Streptococcus bovis et rel." 
       |        `--leaf "Ruminococcus obeum et rel." 
       `--[dendrogram w/ 2 branches and 7 members at h = 0.422]
          |--[dendrogram w/ 2 branches and 6 members at h = 0.402]
          |  |--[dendrogram w/ 2 branches and 4 members at h = 0.278]
          |  |  |--[dendrogram w/ 2 branches and 3 members at h = 0.228]
          |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.109]
          |  |  |  |  |--leaf "Clostridium nexile et rel." 
          |  |  |  |  `--leaf "Outgrouping clostridium cluster XIVa" 
          |  |  |  `--leaf "Clostridium orbiscindens et rel." 
          |  |  `--leaf "Uncultured Mollicutes" 
          |  `--[dendrogram w/ 2 branches and 2 members at h = 0.221]
          |     |--leaf "Sporobacter termitidis et rel." 
          |     `--leaf "Uncultured Clostridiales II" 
          `--leaf "Prevotella oralis et rel."

Code
  v@matrix_param[names(v@matrix_param) != "cell_fun"]
Output
  $row_km
  [1] 1

  $row_km_repeats
  [1] 1

  $row_gap
  [1] 1mm

  $column_km
  [1] 1

  $column_km_repeats
  [1] 1

  $column_gap
  [1] 1mm

  $jitter
  [1] FALSE

  $gp
  $col
  [1] "white"

  $lwd
  [1] 0.5

  $lineheight
  [1] 0.9


  $border
  [1] NA

  $border_gp
  $col
  [1] "black"


  $width
  [1] 5null

  $height
  [1] 30null

Code
  v@matrix_color_mapping
Output
  Continuous color mapping:
  name: pearson 
  default breaks:
  [1] -1.0 -0.5  0.0  0.5  1.0

  colors:
  [1] "#4A6FE3FF" "#6B82E1FF" "#E2E2E2FF" "#DA5F7DFF" "#D33F6AFF"

Code
  v@right_annotation@anno_list
Output
  $prev
  A single annotation with anno_barplot() function
    name: prev 
    position: row 
    no legend
    items: 30 
    width: 15mm 
    height: 1npc 
    this object is  subsettable
    8.94924444444444mm extension on the bottom

  $abund
  A single annotation with anno_boxplot() function
    name: abund 
    position: row 
    no legend
    items: 30 
    width: 15mm 
    height: 1npc 
    this object is  subsettable
    8.94924444444444mm extension on the bottom

Code
  v@top_annotation@anno_list
Output
  $x
  A single annotation with anno_histogram() function
    name: x 
    position: column 
    no legend
    items: 5 
    width: 1npc 
    height: 10mm 
    this object is  subsettable
    3.56915555555556mm extension on the left 
    2.56915555555556mm extension on the right

  $`log10(x+1)`
  A single annotation with anno_boxplot() function
    name: log10(x+1) 
    position: column 
    no legend
    items: 5 
    width: 1npc 
    height: 20mm 
    this object is  subsettable
    5.92288888888889mm extension on the left 
    15.0377333333333mm extension on the right

Code
  str(v@column_dend_param$obj)
Output
  --[dendrogram w/ 2 branches and 5 members at h = 2.23]
    |--leaf "african" 
    `--[dendrogram w/ 2 branches and 4 members at h = 0.946]
       |--[dendrogram w/ 2 branches and 2 members at h = 0.415]
       |  |--leaf "timepoint" 
       |  `--leaf "timepoint.within.group" 
       `--[dendrogram w/ 2 branches and 2 members at h = 0.738]
          |--leaf "weight" 
          `--leaf "female"

Code
  str(v@row_dend_param$obj)
Output
  --[dendrogram w/ 2 branches and 30 members at h = 1.62]
    |--[dendrogram w/ 2 branches and 6 members at h = 0.301]
    |  |--[dendrogram w/ 2 branches and 2 members at h = 0.0866]
    |  |  |--leaf "Allistipes et rel." 
    |  |  `--leaf "Bacteroides vulgatus et rel." 
    |  `--[dendrogram w/ 2 branches and 4 members at h = 0.223]
    |     |--[dendrogram w/ 2 branches and 3 members at h = 0.139]
    |     |  |--[dendrogram w/ 2 branches and 2 members at h = 0.119]
    |     |  |  |--leaf "Bacteroides plebeius et rel." 
    |     |  |  `--leaf "Tannerella et rel." 
    |     |  `--leaf "Parabacteroides distasonis et rel." 
    |     `--leaf "Bacteroides uniformis et rel." 
    `--[dendrogram w/ 2 branches and 24 members at h = 1.11]
       |--[dendrogram w/ 2 branches and 17 members at h = 0.716]
       |  |--[dendrogram w/ 2 branches and 11 members at h = 0.547]
       |  |  |--[dendrogram w/ 2 branches and 7 members at h = 0.39]
       |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 0.309]
       |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.165]
       |  |  |  |  |  |--leaf "Prevotella tannerae et rel." 
       |  |  |  |  |  `--leaf "Anaerostipes caccae et rel." 
       |  |  |  |  `--leaf "Bryantella formatexigens et rel." 
       |  |  |  `--[dendrogram w/ 2 branches and 4 members at h = 0.213]
       |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0.0816]
       |  |  |     |  |--leaf "Subdoligranulum variable at rel." 
       |  |  |     |  `--leaf "Bifidobacterium" 
       |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 0.132]
       |  |  |        |--leaf "Clostridium symbiosum et rel." 
       |  |  |        `--leaf "Clostridium sphenoides et rel." 
       |  |  `--[dendrogram w/ 2 branches and 4 members at h = 0.352]
       |  |     |--leaf "Bacteroides fragilis et rel." 
       |  |     `--[dendrogram w/ 2 branches and 3 members at h = 0.249]
       |  |        |--[dendrogram w/ 2 branches and 2 members at h = 0.214]
       |  |        |  |--leaf "Lachnospira pectinoschiza et rel." 
       |  |        |  `--leaf "Lachnobacillus bovis et rel." 
       |  |        `--leaf "Akkermansia" 
       |  `--[dendrogram w/ 2 branches and 6 members at h = 0.295]
       |     |--[dendrogram w/ 2 branches and 2 members at h = 0.119]
       |     |  |--leaf "Escherichia coli et rel." 
       |     |  `--leaf "Clostridium cellulosi et rel." 
       |     `--[dendrogram w/ 2 branches and 4 members at h = 0.23]
       |        |--[dendrogram w/ 2 branches and 3 members at h = 0.119]
       |        |  |--leaf "Phascolarctobacterium faecium et rel." 
       |        |  `--[dendrogram w/ 2 branches and 2 members at h = 0.0523]
       |        |     |--leaf "Streptococcus mitis et rel." 
       |        |     `--leaf "Streptococcus bovis et rel." 
       |        `--leaf "Ruminococcus obeum et rel." 
       `--[dendrogram w/ 2 branches and 7 members at h = 0.422]
          |--[dendrogram w/ 2 branches and 6 members at h = 0.402]
          |  |--[dendrogram w/ 2 branches and 4 members at h = 0.278]
          |  |  |--[dendrogram w/ 2 branches and 3 members at h = 0.228]
          |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.109]
          |  |  |  |  |--leaf "Clostridium nexile et rel." 
          |  |  |  |  `--leaf "Outgrouping clostridium cluster XIVa" 
          |  |  |  `--leaf "Clostridium orbiscindens et rel." 
          |  |  `--leaf "Uncultured Mollicutes" 
          |  `--[dendrogram w/ 2 branches and 2 members at h = 0.221]
          |     |--leaf "Sporobacter termitidis et rel." 
          |     `--leaf "Uncultured Clostridiales II" 
          `--leaf "Prevotella oralis et rel."

comp_heatmap doesn't change:

Code
  p@matrix_param
Output
  $row_km
  [1] 1

  $row_km_repeats
  [1] 1

  $row_gap
  [1] 1mm

  $column_km
  [1] 1

  $column_km_repeats
  [1] 1

  $column_gap
  [1] 1mm

  $jitter
  [1] FALSE

  $gp
  $col
  [1] "white"

  $lwd
  [1] 0.5

  $lineheight
  [1] 0.9


  $border
  [1] NA

  $border_gp
  $col
  [1] "black"


  $width
  [1] 222null

  $height
  [1] 30null

Code
  p@matrix_color_mapping
Output
  Continuous color mapping:
  name: Abd. 
  default breaks:
  [1] -2  0  2  4  6  8

  colors:
  [1] "#FDF5EBFF" "#EF9B66FF" "#DE2F52FF" "#910062FF" "#40043FFF" "#070707FF"

Code
  p@right_annotation@anno_list
Output
  $prev
  A single annotation with anno_barplot() function
    name: prev 
    position: row 
    no legend
    items: 30 
    width: 15mm 
    height: 1npc 
    this object is  subsettable
    8.94924444444444mm extension on the bottom

  $abund
  A single annotation with anno_boxplot() function
    name: abund 
    position: row 
    no legend
    items: 30 
    width: 15mm 
    height: 1npc 
    this object is  subsettable
    8.94924444444444mm extension on the bottom

Code
  str(p@column_dend_param$obj)
Output
  --[dendrogram w/ 2 branches and 222 members at h = 61]
    |--[dendrogram w/ 2 branches and 94 members at h = 22.7]
    |  |--[dendrogram w/ 2 branches and 50 members at h = 17.1]
    |  |  |--[dendrogram w/ 2 branches and 32 members at h = 11.8]
    |  |  |  |--[dendrogram w/ 2 branches and 14 members at h = 9.27]
    |  |  |  |  |--[dendrogram w/ 2 branches and 5 members at h = 6.76]
    |  |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 5.37]
    |  |  |  |  |  |  |--leaf "Sample-35" 
    |  |  |  |  |  |  `--leaf "Sample-132" 
    |  |  |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 4.54]
    |  |  |  |  |     |--leaf "Sample-112" 
    |  |  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.12]
    |  |  |  |  |        |--leaf "Sample-118" 
    |  |  |  |  |        `--leaf "Sample-69" 
    |  |  |  |  `--[dendrogram w/ 2 branches and 9 members at h = 7.26]
    |  |  |  |     |--[dendrogram w/ 2 branches and 6 members at h = 4.96]
    |  |  |  |     |  |--[dendrogram w/ 2 branches and 3 members at h = 3.18]
    |  |  |  |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.72]
    |  |  |  |     |  |  |  |--leaf "Sample-220" 
    |  |  |  |     |  |  |  `--leaf "Sample-31" 
    |  |  |  |     |  |  `--leaf "Sample-15" 
    |  |  |  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 4.02]
    |  |  |  |     |     |--[dendrogram w/ 2 branches and 2 members at h = 2.98]
    |  |  |  |     |     |  |--leaf "Sample-5" 
    |  |  |  |     |     |  `--leaf "Sample-208" 
    |  |  |  |     |     `--leaf "Sample-54" 
    |  |  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 3.59]
    |  |  |  |        |--[dendrogram w/ 2 branches and 2 members at h = 1.92]
    |  |  |  |        |  |--leaf "Sample-53" 
    |  |  |  |        |  `--leaf "Sample-102" 
    |  |  |  |        `--leaf "Sample-79" 
    |  |  |  `--[dendrogram w/ 2 branches and 18 members at h = 7.47]
    |  |  |     |--[dendrogram w/ 2 branches and 11 members at h = 6.28]
    |  |  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 2]
    |  |  |     |  |  |--leaf "Sample-193" 
    |  |  |     |  |  `--leaf "Sample-190" 
    |  |  |     |  `--[dendrogram w/ 2 branches and 9 members at h = 5.39]
    |  |  |     |     |--[dendrogram w/ 2 branches and 7 members at h = 4.69]
    |  |  |     |     |  |--[dendrogram w/ 2 branches and 5 members at h = 3.79]
    |  |  |     |     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 3.27]
    |  |  |     |     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.77]
    |  |  |     |     |  |  |  |  |--leaf "Sample-187" 
    |  |  |     |     |  |  |  |  `--leaf "Sample-107" 
    |  |  |     |     |  |  |  `--leaf "Sample-94" 
    |  |  |     |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.53]
    |  |  |     |     |  |     |--leaf "Sample-168" 
    |  |  |     |     |  |     `--leaf "Sample-182" 
    |  |  |     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 3.19]
    |  |  |     |     |     |--leaf "Sample-161" 
    |  |  |     |     |     `--leaf "Sample-212" 
    |  |  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 3.22]
    |  |  |     |        |--leaf "Sample-207" 
    |  |  |     |        `--leaf "Sample-61" 
    |  |  |     `--[dendrogram w/ 2 branches and 7 members at h = 6.61]
    |  |  |        |--[dendrogram w/ 2 branches and 3 members at h = 3.89]
    |  |  |        |  |--[dendrogram w/ 2 branches and 2 members at h = 2.87]
    |  |  |        |  |  |--leaf "Sample-209" 
    |  |  |        |  |  `--leaf "Sample-210" 
    |  |  |        |  `--leaf "Sample-213" 
    |  |  |        `--[dendrogram w/ 2 branches and 4 members at h = 4.65]
    |  |  |           |--[dendrogram w/ 2 branches and 3 members at h = 3.33]
    |  |  |           |  |--leaf "Sample-50" 
    |  |  |           |  `--[dendrogram w/ 2 branches and 2 members at h = 1.91]
    |  |  |           |     |--leaf "Sample-89" 
    |  |  |           |     `--leaf "Sample-104" 
    |  |  |           `--leaf "Sample-56" 
    |  |  `--[dendrogram w/ 2 branches and 18 members at h = 11.5]
    |  |     |--[dendrogram w/ 2 branches and 8 members at h = 6.82]
    |  |     |  |--[dendrogram w/ 2 branches and 5 members at h = 4.69]
    |  |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 4.2]
    |  |     |  |  |  |--leaf "Sample-55" 
    |  |     |  |  |  `--leaf "Sample-95" 
    |  |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 3.34]
    |  |     |  |     |--leaf "Sample-81" 
    |  |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.83]
    |  |     |  |        |--leaf "Sample-88" 
    |  |     |  |        `--leaf "Sample-101" 
    |  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 4.18]
    |  |     |     |--[dendrogram w/ 2 branches and 2 members at h = 2.6]
    |  |     |     |  |--leaf "Sample-60" 
    |  |     |     |  `--leaf "Sample-77" 
    |  |     |     `--leaf "Sample-66" 
    |  |     `--[dendrogram w/ 2 branches and 10 members at h = 8.16]
    |  |        |--[dendrogram w/ 2 branches and 8 members at h = 7.88]
    |  |        |  |--[dendrogram w/ 2 branches and 5 members at h = 5.95]
    |  |        |  |  |--[dendrogram w/ 2 branches and 2 members at h = 3.64]
    |  |        |  |  |  |--leaf "Sample-67" 
    |  |        |  |  |  `--leaf "Sample-86" 
    |  |        |  |  `--[dendrogram w/ 2 branches and 3 members at h = 4.61]
    |  |        |  |     |--[dendrogram w/ 2 branches and 2 members at h = 4.26]
    |  |        |  |     |  |--leaf "Sample-6" 
    |  |        |  |     |  `--leaf "Sample-59" 
    |  |        |  |     `--leaf "Sample-93" 
    |  |        |  `--[dendrogram w/ 2 branches and 3 members at h = 4.85]
    |  |        |     |--leaf "Sample-52" 
    |  |        |     `--[dendrogram w/ 2 branches and 2 members at h = 2.52]
    |  |        |        |--leaf "Sample-103" 
    |  |        |        `--leaf "Sample-99" 
    |  |        `--[dendrogram w/ 2 branches and 2 members at h = 3.7]
    |  |           |--leaf "Sample-105" 
    |  |           `--leaf "Sample-9" 
    |  `--[dendrogram w/ 2 branches and 44 members at h = 18.2]
    |     |--[dendrogram w/ 2 branches and 10 members at h = 13.9]
    |     |  |--[dendrogram w/ 2 branches and 5 members at h = 8.2]
    |     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 5.28]
    |     |  |  |  |--leaf "Sample-14" 
    |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 3.57]
    |     |  |  |     |--leaf "Sample-30" 
    |     |  |  |     `--leaf "Sample-22" 
    |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 4.73]
    |     |  |     |--leaf "Sample-4" 
    |     |  |     `--leaf "Sample-40" 
    |     |  `--[dendrogram w/ 2 branches and 5 members at h = 6.67]
    |     |     |--[dendrogram w/ 2 branches and 2 members at h = 2.06]
    |     |     |  |--leaf "Sample-121" 
    |     |     |  `--leaf "Sample-126" 
    |     |     `--[dendrogram w/ 2 branches and 3 members at h = 4.37]
    |     |        |--[dendrogram w/ 2 branches and 2 members at h = 2.83]
    |     |        |  |--leaf "Sample-137" 
    |     |        |  `--leaf "Sample-147" 
    |     |        `--leaf "Sample-49" 
    |     `--[dendrogram w/ 2 branches and 34 members at h = 15.4]
    |        |--[dendrogram w/ 2 branches and 19 members at h = 8.97]
    |        |  |--[dendrogram w/ 2 branches and 6 members at h = 6.78]
    |        |  |  |--[dendrogram w/ 2 branches and 4 members at h = 4.22]
    |        |  |  |  |--leaf "Sample-16" 
    |        |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2.56]
    |        |  |  |     |--leaf "Sample-218" 
    |        |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.23]
    |        |  |  |        |--leaf "Sample-29" 
    |        |  |  |        `--leaf "Sample-21" 
    |        |  |  `--[dendrogram w/ 2 branches and 2 members at h = 3.84]
    |        |  |     |--leaf "Sample-7" 
    |        |  |     `--leaf "Sample-2" 
    |        |  `--[dendrogram w/ 2 branches and 13 members at h = 8.36]
    |        |     |--[dendrogram w/ 2 branches and 7 members at h = 6.49]
    |        |     |  |--[dendrogram w/ 2 branches and 4 members at h = 5.35]
    |        |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 3.82]
    |        |     |  |  |  |--leaf "Sample-25" 
    |        |     |  |  |  `--leaf "Sample-222" 
    |        |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 3.61]
    |        |     |  |     |--leaf "Sample-3" 
    |        |     |  |     `--leaf "Sample-214" 
    |        |     |  `--[dendrogram w/ 2 branches and 3 members at h = 3.87]
    |        |     |     |--[dendrogram w/ 2 branches and 2 members at h = 2.85]
    |        |     |     |  |--leaf "Sample-8" 
    |        |     |     |  `--leaf "Sample-20" 
    |        |     |     `--leaf "Sample-23" 
    |        |     `--[dendrogram w/ 2 branches and 6 members at h = 5.93]
    |        |        |--[dendrogram w/ 2 branches and 4 members at h = 4.12]
    |        |        |  |--[dendrogram w/ 2 branches and 3 members at h = 3.08]
    |        |        |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.7]
    |        |        |  |  |  |--leaf "Sample-217" 
    |        |        |  |  |  `--leaf "Sample-12" 
    |        |        |  |  `--leaf "Sample-28" 
    |        |        |  `--leaf "Sample-13" 
    |        |        `--[dendrogram w/ 2 branches and 2 members at h = 4.71]
    |        |           |--leaf "Sample-11" 
    |        |           `--leaf "Sample-10" 
    |        `--[dendrogram w/ 2 branches and 15 members at h = 9.37]
    |           |--[dendrogram w/ 2 branches and 11 members at h = 7.06]
    |           |  |--[dendrogram w/ 2 branches and 6 members at h = 5.67]
    |           |  |  |--[dendrogram w/ 2 branches and 2 members at h = 4.95]
    |           |  |  |  |--leaf "Sample-76" 
    |           |  |  |  `--leaf "Sample-83" 
    |           |  |  `--[dendrogram w/ 2 branches and 4 members at h = 3.53]
    |           |  |     |--[dendrogram w/ 2 branches and 2 members at h = 3.15]
    |           |  |     |  |--leaf "Sample-63" 
    |           |  |     |  `--leaf "Sample-64" 
    |           |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.66]
    |           |  |        |--leaf "Sample-90" 
    |           |  |        `--leaf "Sample-57" 
    |           |  `--[dendrogram w/ 2 branches and 5 members at h = 4.2]
    |           |     |--[dendrogram w/ 2 branches and 2 members at h = 2.3]
    |           |     |  |--leaf "Sample-58" 
    |           |     |  `--leaf "Sample-91" 
    |           |     `--[dendrogram w/ 2 branches and 3 members at h = 3.69]
    |           |        |--leaf "Sample-24" 
    |           |        `--[dendrogram w/ 2 branches and 2 members at h = 3.22]
    |           |           |--leaf "Sample-65" 
    |           |           `--leaf "Sample-85" 
    |           `--[dendrogram w/ 2 branches and 4 members at h = 6.22]
    |              |--[dendrogram w/ 2 branches and 2 members at h = 2.31]
    |              |  |--leaf "Sample-92" 
    |              |  `--leaf "Sample-98" 
    |              `--[dendrogram w/ 2 branches and 2 members at h = 3.18]
    |                 |--leaf "Sample-96" 
    |                 `--leaf "Sample-97" 
    `--[dendrogram w/ 2 branches and 128 members at h = 33.3]
       |--[dendrogram w/ 2 branches and 63 members at h = 24]
       |  |--[dendrogram w/ 2 branches and 38 members at h = 17.1]
       |  |  |--[dendrogram w/ 2 branches and 9 members at h = 7.82]
       |  |  |  |--[dendrogram w/ 2 branches and 6 members at h = 5.62]
       |  |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 3.55]
       |  |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.17]
       |  |  |  |  |  |  |--leaf "Sample-75" 
       |  |  |  |  |  |  `--leaf "Sample-84" 
       |  |  |  |  |  `--leaf "Sample-100" 
       |  |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2]
       |  |  |  |     |--leaf "Sample-18" 
       |  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 1.63]
       |  |  |  |        |--leaf "Sample-26" 
       |  |  |  |        `--leaf "Sample-215" 
       |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 4.21]
       |  |  |     |--leaf "Sample-221" 
       |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 1.86]
       |  |  |        |--leaf "Sample-216" 
       |  |  |        `--leaf "Sample-27" 
       |  |  `--[dendrogram w/ 2 branches and 29 members at h = 13.9]
       |  |     |--[dendrogram w/ 2 branches and 11 members at h = 8.61]
       |  |     |  |--[dendrogram w/ 2 branches and 7 members at h = 7.38]
       |  |     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 5.27]
       |  |     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 3.15]
       |  |     |  |  |  |  |--leaf "Sample-80" 
       |  |     |  |  |  |  `--leaf "Sample-87" 
       |  |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 3.87]
       |  |     |  |  |     |--leaf "Sample-51" 
       |  |     |  |  |     `--leaf "Sample-108" 
       |  |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 3.48]
       |  |     |  |     |--leaf "Sample-133" 
       |  |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.55]
       |  |     |  |        |--leaf "Sample-143" 
       |  |     |  |        `--leaf "Sample-44" 
       |  |     |  `--[dendrogram w/ 2 branches and 4 members at h = 4.56]
       |  |     |     |--[dendrogram w/ 2 branches and 2 members at h = 4.07]
       |  |     |     |  |--leaf "Sample-34" 
       |  |     |     |  `--leaf "Sample-111" 
       |  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 2.99]
       |  |     |        |--leaf "Sample-142" 
       |  |     |        `--leaf "Sample-43" 
       |  |     `--[dendrogram w/ 2 branches and 18 members at h = 10.5]
       |  |        |--[dendrogram w/ 2 branches and 8 members at h = 8.35]
       |  |        |  |--[dendrogram w/ 2 branches and 3 members at h = 4.4]
       |  |        |  |  |--leaf "Sample-149" 
       |  |        |  |  `--[dendrogram w/ 2 branches and 2 members at h = 3.29]
       |  |        |  |     |--leaf "Sample-129" 
       |  |        |  |     `--leaf "Sample-123" 
       |  |        |  `--[dendrogram w/ 2 branches and 5 members at h = 6.68]
       |  |        |     |--[dendrogram w/ 2 branches and 3 members at h = 5.33]
       |  |        |     |  |--[dendrogram w/ 2 branches and 2 members at h = 4.23]
       |  |        |     |  |  |--leaf "Sample-163" 
       |  |        |     |  |  `--leaf "Sample-17" 
       |  |        |     |  `--leaf "Sample-165" 
       |  |        |     `--[dendrogram w/ 2 branches and 2 members at h = 4.04]
       |  |        |        |--leaf "Sample-115" 
       |  |        |        `--leaf "Sample-136" 
       |  |        `--[dendrogram w/ 2 branches and 10 members at h = 8.68]
       |  |           |--[dendrogram w/ 2 branches and 4 members at h = 5.97]
       |  |           |  |--[dendrogram w/ 2 branches and 2 members at h = 4.39]
       |  |           |  |  |--leaf "Sample-146" 
       |  |           |  |  `--leaf "Sample-162" 
       |  |           |  `--[dendrogram w/ 2 branches and 2 members at h = 5.26]
       |  |           |     |--leaf "Sample-19" 
       |  |           |     `--leaf "Sample-156" 
       |  |           `--[dendrogram w/ 2 branches and 6 members at h = 6.07]
       |  |              |--[dendrogram w/ 2 branches and 2 members at h = 3.86]
       |  |              |  |--leaf "Sample-211" 
       |  |              |  `--leaf "Sample-219" 
       |  |              `--[dendrogram w/ 2 branches and 4 members at h = 4.63]
       |  |                 |--leaf "Sample-169" 
       |  |                 `--[dendrogram w/ 2 branches and 3 members at h = 2.77]
       |  |                    |--leaf "Sample-174" 
       |  |                    `--[dendrogram w/ 2 branches and 2 members at h = 2.53]
       |  |                       |--leaf "Sample-178" 
       |  |                       `--leaf "Sample-184" 
       |  `--[dendrogram w/ 2 branches and 25 members at h = 21.3]
       |     |--[dendrogram w/ 2 branches and 17 members at h = 11.5]
       |     |  |--[dendrogram w/ 2 branches and 8 members at h = 9.71]
       |     |  |  |--[dendrogram w/ 2 branches and 5 members at h = 6.95]
       |     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 4.13]
       |     |  |  |  |  |--leaf "Sample-78" 
       |     |  |  |  |  `--leaf "Sample-106" 
       |     |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 4.16]
       |     |  |  |     |--leaf "Sample-62" 
       |     |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.62]
       |     |  |  |        |--leaf "Sample-82" 
       |     |  |  |        `--leaf "Sample-74" 
       |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 5.25]
       |     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 3.38]
       |     |  |     |  |--leaf "Sample-196" 
       |     |  |     |  `--leaf "Sample-198" 
       |     |  |     `--leaf "Sample-204" 
       |     |  `--[dendrogram w/ 2 branches and 9 members at h = 7.6]
       |     |     |--[dendrogram w/ 2 branches and 5 members at h = 5.8]
       |     |     |  |--[dendrogram w/ 2 branches and 3 members at h = 3.88]
       |     |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.06]
       |     |     |  |  |  |--leaf "Sample-202" 
       |     |     |  |  |  `--leaf "Sample-200" 
       |     |     |  |  `--leaf "Sample-206" 
       |     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 4.53]
       |     |     |     |--leaf "Sample-125" 
       |     |     |     `--leaf "Sample-189" 
       |     |     `--[dendrogram w/ 2 branches and 4 members at h = 5.26]
       |     |        |--[dendrogram w/ 2 branches and 3 members at h = 4.13]
       |     |        |  |--[dendrogram w/ 2 branches and 2 members at h = 3.12]
       |     |        |  |  |--leaf "Sample-192" 
       |     |        |  |  `--leaf "Sample-159" 
       |     |        |  `--leaf "Sample-181" 
       |     |        `--leaf "Sample-38" 
       |     `--[dendrogram w/ 2 branches and 8 members at h = 8.76]
       |        |--[dendrogram w/ 2 branches and 2 members at h = 2.78]
       |        |  |--leaf "Sample-47" 
       |        |  `--leaf "Sample-46" 
       |        `--[dendrogram w/ 2 branches and 6 members at h = 6.91]
       |           |--[dendrogram w/ 2 branches and 4 members at h = 5.32]
       |           |  |--[dendrogram w/ 2 branches and 2 members at h = 3.39]
       |           |  |  |--leaf "Sample-145" 
       |           |  |  `--leaf "Sample-135" 
       |           |  `--[dendrogram w/ 2 branches and 2 members at h = 4.2]
       |           |     |--leaf "Sample-114" 
       |           |     `--leaf "Sample-37" 
       |           `--[dendrogram w/ 2 branches and 2 members at h = 1.5]
       |              |--leaf "Sample-124" 
       |              `--leaf "Sample-120" 
       `--[dendrogram w/ 2 branches and 65 members at h = 18.8]
          |--[dendrogram w/ 2 branches and 51 members at h = 16.7]
          |  |--[dendrogram w/ 2 branches and 13 members at h = 11.6]
          |  |  |--[dendrogram w/ 2 branches and 7 members at h = 11.4]
          |  |  |  |--[dendrogram w/ 2 branches and 4 members at h = 5.66]
          |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 4.24]
          |  |  |  |  |  |--leaf "Sample-127" 
          |  |  |  |  |  `--leaf "Sample-45" 
          |  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 3.79]
          |  |  |  |     |--leaf "Sample-134" 
          |  |  |  |     `--leaf "Sample-144" 
          |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2.83]
          |  |  |     |--leaf "Sample-140" 
          |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.18]
          |  |  |        |--leaf "Sample-41" 
          |  |  |        `--leaf "Sample-130" 
          |  |  `--[dendrogram w/ 2 branches and 6 members at h = 5.41]
          |  |     |--[dendrogram w/ 2 branches and 3 members at h = 3.55]
          |  |     |  |--leaf "Sample-119" 
          |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 1.68]
          |  |     |     |--leaf "Sample-131" 
          |  |     |     `--leaf "Sample-141" 
          |  |     `--[dendrogram w/ 2 branches and 3 members at h = 4.24]
          |  |        |--[dendrogram w/ 2 branches and 2 members at h = 2.89]
          |  |        |  |--leaf "Sample-33" 
          |  |        |  `--leaf "Sample-110" 
          |  |        `--leaf "Sample-42" 
          |  `--[dendrogram w/ 2 branches and 38 members at h = 13.8]
          |     |--[dendrogram w/ 2 branches and 18 members at h = 12.5]
          |     |  |--[dendrogram w/ 2 branches and 12 members at h = 9.53]
          |     |  |  |--[dendrogram w/ 2 branches and 8 members at h = 7.75]
          |     |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 4.43]
          |     |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.9]
          |     |  |  |  |  |  |--leaf "Sample-48" 
          |     |  |  |  |  |  `--leaf "Sample-148" 
          |     |  |  |  |  `--leaf "Sample-1" 
          |     |  |  |  `--[dendrogram w/ 2 branches and 5 members at h = 6.59]
          |     |  |  |     |--[dendrogram w/ 2 branches and 3 members at h = 5.02]
          |     |  |  |     |  |--leaf "Sample-39" 
          |     |  |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 0.84]
          |     |  |  |     |     |--leaf "Sample-154" 
          |     |  |  |     |     `--leaf "Sample-116" 
          |     |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.48]
          |     |  |  |        |--leaf "Sample-36" 
          |     |  |  |        `--leaf "Sample-113" 
          |     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 5.04]
          |     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 2.61]
          |     |  |     |  |--leaf "Sample-177" 
          |     |  |     |  `--leaf "Sample-173" 
          |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.78]
          |     |  |        |--leaf "Sample-73" 
          |     |  |        `--leaf "Sample-155" 
          |     |  `--[dendrogram w/ 2 branches and 6 members at h = 4.78]
          |     |     |--[dendrogram w/ 2 branches and 3 members at h = 3.48]
          |     |     |  |--[dendrogram w/ 2 branches and 2 members at h = 2.64]
          |     |     |  |  |--leaf "Sample-157" 
          |     |     |  |  `--leaf "Sample-164" 
          |     |     |  `--leaf "Sample-179" 
          |     |     `--[dendrogram w/ 2 branches and 3 members at h = 3.03]
          |     |        |--[dendrogram w/ 2 branches and 2 members at h = 1.74]
          |     |        |  |--leaf "Sample-171" 
          |     |        |  `--leaf "Sample-185" 
          |     |        `--leaf "Sample-175" 
          |     `--[dendrogram w/ 2 branches and 20 members at h = 9.49]
          |        |--[dendrogram w/ 2 branches and 14 members at h = 7.23]
          |        |  |--[dendrogram w/ 2 branches and 10 members at h = 6.85]
          |        |  |  |--[dendrogram w/ 2 branches and 4 members at h = 6.57]
          |        |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 5.1]
          |        |  |  |  |  |--leaf "Sample-183" 
          |        |  |  |  |  `--leaf "Sample-167" 
          |        |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 4.44]
          |        |  |  |     |--leaf "Sample-32" 
          |        |  |  |     `--leaf "Sample-109" 
          |        |  |  `--[dendrogram w/ 2 branches and 6 members at h = 5.64]
          |        |  |     |--[dendrogram w/ 2 branches and 3 members at h = 3.15]
          |        |  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 2.53]
          |        |  |     |  |  |--leaf "Sample-195" 
          |        |  |     |  |  `--leaf "Sample-197" 
          |        |  |     |  `--leaf "Sample-203" 
          |        |  |     `--[dendrogram w/ 2 branches and 3 members at h = 1.71]
          |        |  |        |--[dendrogram w/ 2 branches and 2 members at h = 1.4]
          |        |  |        |  |--leaf "Sample-199" 
          |        |  |        |  `--leaf "Sample-205" 
          |        |  |        `--leaf "Sample-201" 
          |        |  `--[dendrogram w/ 2 branches and 4 members at h = 3.85]
          |        |     |--leaf "Sample-160" 
          |        |     `--[dendrogram w/ 2 branches and 3 members at h = 2.41]
          |        |        |--leaf "Sample-188" 
          |        |        `--[dendrogram w/ 2 branches and 2 members at h = 1.1]
          |        |           |--leaf "Sample-191" 
          |        |           `--leaf "Sample-194" 
          |        `--[dendrogram w/ 2 branches and 6 members at h = 5.37]
          |           |--[dendrogram w/ 2 branches and 3 members at h = 2.5]
          |           |  |--leaf "Sample-72" 
          |           |  `--[dendrogram w/ 2 branches and 2 members at h = 1.38]
          |           |     |--leaf "Sample-153" 
          |           |     `--leaf "Sample-152" 
          |           `--[dendrogram w/ 2 branches and 3 members at h = 4.28]
          |              |--[dendrogram w/ 2 branches and 2 members at h = 2.61]
          |              |  |--leaf "Sample-150" 
          |              |  `--leaf "Sample-71" 
          |              `--leaf "Sample-151" 
          `--[dendrogram w/ 2 branches and 14 members at h = 12.5]
             |--[dendrogram w/ 2 branches and 8 members at h = 7.08]
             |  |--[dendrogram w/ 2 branches and 6 members at h = 5.35]
             |  |  |--[dendrogram w/ 2 branches and 2 members at h = 1.41]
             |  |  |  |--leaf "Sample-128" 
             |  |  |  `--leaf "Sample-122" 
             |  |  `--[dendrogram w/ 2 branches and 4 members at h = 3.09]
             |  |     |--[dendrogram w/ 2 branches and 3 members at h = 2.79]
             |  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 1.94]
             |  |     |  |  |--leaf "Sample-138" 
             |  |     |  |  `--leaf "Sample-139" 
             |  |     |  `--leaf "Sample-70" 
             |  |     `--leaf "Sample-68" 
             |  `--[dendrogram w/ 2 branches and 2 members at h = 5.12]
             |     |--leaf "Sample-117" 
             |     `--leaf "Sample-166" 
             `--[dendrogram w/ 2 branches and 6 members at h = 6.27]
                |--[dendrogram w/ 2 branches and 4 members at h = 4.93]
                |  |--leaf "Sample-186" 
                |  `--[dendrogram w/ 2 branches and 3 members at h = 3.18]
                |     |--[dendrogram w/ 2 branches and 2 members at h = 2.18]
                |     |  |--leaf "Sample-172" 
                |     |  `--leaf "Sample-176" 
                |     `--leaf "Sample-170" 
                `--[dendrogram w/ 2 branches and 2 members at h = 3.85]
                   |--leaf "Sample-158" 
                   `--leaf "Sample-180"

Code
  str(p@row_dend_param$obj)
Output
  --[dendrogram w/ 2 branches and 30 members at h = 91.4]
    |--[dendrogram w/ 2 branches and 8 members at h = 40.2]
    |  |--[dendrogram w/ 2 branches and 7 members at h = 38.2]
    |  |  |--leaf "Prevotella oralis et rel." 
    |  |  `--[dendrogram w/ 2 branches and 6 members at h = 27.8]
    |  |     |--leaf "Clostridium cellulosi et rel." 
    |  |     `--[dendrogram w/ 2 branches and 5 members at h = 16.8]
    |  |        |--leaf "Sporobacter termitidis et rel." 
    |  |        `--[dendrogram w/ 2 branches and 4 members at h = 14]
    |  |           |--[dendrogram w/ 2 branches and 2 members at h = 11.6]
    |  |           |  |--leaf "Clostridium orbiscindens et rel." 
    |  |           |  `--leaf "Ruminococcus obeum et rel." 
    |  |           `--[dendrogram w/ 2 branches and 2 members at h = 13.7]
    |  |              |--leaf "Subdoligranulum variable at rel." 
    |  |              `--leaf "Clostridium symbiosum et rel." 
    |  `--leaf "Bacteroides vulgatus et rel." 
    `--[dendrogram w/ 2 branches and 22 members at h = 49.2]
       |--[dendrogram w/ 2 branches and 7 members at h = 31.6]
       |  |--[dendrogram w/ 2 branches and 3 members at h = 15.6]
       |  |  |--[dendrogram w/ 2 branches and 2 members at h = 14.8]
       |  |  |  |--leaf "Allistipes et rel." 
       |  |  |  `--leaf "Parabacteroides distasonis et rel." 
       |  |  `--leaf "Bacteroides fragilis et rel." 
       |  `--[dendrogram w/ 2 branches and 4 members at h = 22.8]
       |     |--leaf "Bacteroides uniformis et rel." 
       |     `--[dendrogram w/ 2 branches and 3 members at h = 12.2]
       |        |--leaf "Prevotella tannerae et rel." 
       |        `--[dendrogram w/ 2 branches and 2 members at h = 8.81]
       |           |--leaf "Tannerella et rel." 
       |           `--leaf "Bacteroides plebeius et rel." 
       `--[dendrogram w/ 2 branches and 15 members at h = 39.7]
          |--[dendrogram w/ 2 branches and 5 members at h = 29.5]
          |  |--[dendrogram w/ 2 branches and 2 members at h = 10.2]
          |  |  |--leaf "Streptococcus bovis et rel." 
          |  |  `--leaf "Streptococcus mitis et rel." 
          |  `--[dendrogram w/ 2 branches and 3 members at h = 24.6]
          |     |--[dendrogram w/ 2 branches and 2 members at h = 20.7]
          |     |  |--leaf "Phascolarctobacterium faecium et rel." 
          |     |  `--leaf "Escherichia coli et rel." 
          |     `--leaf "Uncultured Mollicutes" 
          `--[dendrogram w/ 2 branches and 10 members at h = 27.4]
             |--[dendrogram w/ 2 branches and 7 members at h = 19.2]
             |  |--[dendrogram w/ 2 branches and 4 members at h = 15.7]
             |  |  |--leaf "Lachnobacillus bovis et rel." 
             |  |  `--[dendrogram w/ 2 branches and 3 members at h = 12.3]
             |  |     |--[dendrogram w/ 2 branches and 2 members at h = 9.93]
             |  |     |  |--leaf "Clostridium nexile et rel." 
             |  |     |  `--leaf "Outgrouping clostridium cluster XIVa" 
             |  |     `--leaf "Lachnospira pectinoschiza et rel." 
             |  `--[dendrogram w/ 2 branches and 3 members at h = 14.7]
             |     |--[dendrogram w/ 2 branches and 2 members at h = 10.8]
             |     |  |--leaf "Clostridium sphenoides et rel." 
             |     |  `--leaf "Bryantella formatexigens et rel." 
             |     `--leaf "Anaerostipes caccae et rel." 
             `--[dendrogram w/ 2 branches and 3 members at h = 20.1]
                |--[dendrogram w/ 2 branches and 2 members at h = 17.6]
                |  |--leaf "Bifidobacterium" 
                |  `--leaf "Uncultured Clostridiales II" 
                `--leaf "Akkermansia"

david-barnett/microViz documentation built on April 17, 2025, 4:25 a.m.