p.t: Calculates the probabilitis of the observable capture...

Description Usage Arguments

View source: R/pomega.r

Description

Calculates the probabilitis of the three observable capture histories for animals available according to Markov process and allowed to move in and out of searched strip according to Brownian motion.

Usage

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p.t(
  E1,
  Ec,
  p,
  sigmarate,
  k,
  dmax.t,
  planespd,
  halfw.dist = NULL,
  adj.mvt = FALSE,
  io = TRUE,
  idbn = NULL,
  nts = 200,
  ft.normal = TRUE
)

Arguments

E1

expected time available per dive cycle

Ec

expected dive cycle length

p

vector of probs that each obs detects available animal in searched strip

sigmarate

Brownian movement rate parameter

k

time lag between observers

dmax.t

maximum distance can move (in plane-seconds)

planespd

speed observers move along transect

halfw.dist

half-width of searched strip

adj.mvt

if TRUE, uses Brownian hitting time PDF to average over in-out TPMs.

nts

number of integration points for averaging over in-out TPMs.

ft.normal

if TRUE uses normal to approximate Brownian hitting times, else uses exact expression for Brownian hitting times.


david-borchers/LCE_paper documentation built on Nov. 15, 2020, 1:33 p.m.