generate_score_heatmap: generate_score_heatmap

In davidsbutcher/abundancer: Determine Abundances of 12C and 14N from Protein Mass Spectra

Description

generate_score_heatmap

Usage

generate_score_heatmap(
  score_matrix,
  fillOption = "C",
  scaleFillValues = c(0, 1),
  scaleFillLimits = c(0, signif(max(score_matrix), digits = 1)),
  compFunc = "dotproduct"
)

Arguments

score_matrix	A matrix containing 12C and 14N abundances.
fillOption	Argument passed to ggplot2::scale_fill_viridis_c. Controls which viridis color scale is used.
scaleFillValues	Argument passed to ggplot2::scale_fill_viridis_c. Controls positions of colors along the gradient.
scaleFillLimits	Argument passed to ggplot2::scale_fill_viridis_c. Controls values which are represented by the fill range.
compFunc	Function used for comparison of experimental and theoretical spectra. This only impacts the legend label. Acceptable values are "dotproduct" and "scoremfa".

davidsbutcher/abundancer documentation built on Feb. 21, 2022, 2:13 p.m.