plot_best_models: plot_best_models

In demsarjure/autohrf: Automated Generation of Data-Informed GLM Models in Task-Based fMRI Data Analysis

plot_best_models

Description

Plots the best fitted model for each of the specs in autohrf.

Usage

plot_best_models(autofit, ncol = NULL, nrow = NULL)

Arguments

autofit	Output of the autohrf function.
ncol	Number of columns in the plot.
nrow	Number of rows in the plot.

Value

Plots the grid containing a visualization of the best models for each of the provided constraints.

Examples

# prepare model specs
model3 <- data.frame(
  event        = c("encoding", "delay", "response"),
  start_time   = c(0,          2.65,     12.5),
  end_time     = c(3,          12.5,     16)
)

model4 <- data.frame(
  event        = c("fixation", "target", "delay", "response"),
  start_time   = c(0,          2.5,      2.65,    12.5),
  end_time     = c(2.5,        3,        12.5,    15.5)
)

model_constraints <- list(model3, model4)

# run autohrf
df <- flanker
autofit <- autohrf(df, model_constraints, tr = 2.5,
                   population = 2, iter = 2, cores = 1)

# plot best models
plot_best_models(autofit)

demsarjure/autohrf documentation built on Feb. 3, 2024, 6:38 a.m.