Description Usage Arguments Value Author(s)
Retrieve the coordinates of a gene given the gene symbol
1 2 3 4 | ## S4 method for signature 'GvizManager'
getGeneRegionBySymbol(object, symbol,
offsetUp = 0.1, offsetDown = 0.1, exactMatch = TRUE,
ignore.case = FALSE)
|
object |
|
symbol |
character specifying the gene symbol for which coordinates should be retrieved |
offsetUp |
offset for retrieving a flanking region upstream of the gene. Can be an |
offsetDown |
offset for retrieving a flanking region downstream of the gene. Can be an |
exactMatch |
should the symbol match exactly or should it just be contained in the symbol annotation |
ignore.case |
ignore the case when matching the symbol |
a GRanges
object containing the gene coordinates
Fabian Mueller
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