estimate_memory_initialization_MegaLMM: Estimate the memory requirment for a fully initialized...
In deruncie/MegaLMM: MegaLMM
View source: R/helper_functions.R
estimate_memory_initialization_MegaLMM R Documentation
Estimate the memory requirment for a fully initialized MegaLMM model
Description
the initialize_MegaLMM() function can take a while to run, especially
when there are multiple random effects, large numbers of observations, and multiple
groups of traits (with different missing data patterns, stored in the Missing_data_map).
Approximately, the initialization time and memory requirements will be linear in the
number of groups of traits, and scale with h2_divisions^(# random effects).
Usage
estimate_memory_initialization_MegaLMM(MegaLMM_state)
Arguments
MegaLMM_state
The model after calling initialize_variables_MegaLMM
Details
This function will initialize the MegaLMM model for a single h2 vector and extrapolate
to the full grid of h2 vectors, enabeling you to estimate if you have enough
memory allocated to call initialize_MegaLMM()
Value
The estimated memory size in bytes
See Also
estimate_memory_posterior
Examples
estimate_memory_initialization_MegaLMM(MegaLMM_state)
deruncie/MegaLMM documentation built on June 10, 2025, 7:26 p.m.
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View source: R/helper_functions.R
| estimate_memory_initialization_MegaLMM | R Documentation |
Estimate the memory requirment for a fully initialized MegaLMM model
Description
the initialize_MegaLMM() function can take a while to run, especially
when there are multiple random effects, large numbers of observations, and multiple
groups of traits (with different missing data patterns, stored in the Missing_data_map).
Approximately, the initialization time and memory requirements will be linear in the
number of groups of traits, and scale with h2_divisions^(# random effects).
Usage
estimate_memory_initialization_MegaLMM(MegaLMM_state)
Arguments
MegaLMM_state |
The model after calling |
Details
This function will initialize the MegaLMM model for a single h2 vector and extrapolate
to the full grid of h2 vectors, enabeling you to estimate if you have enough
memory allocated to call initialize_MegaLMM()
Value
The estimated memory size in bytes
See Also
estimate_memory_posterior
Examples
estimate_memory_initialization_MegaLMM(MegaLMM_state)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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