tidy_normfinder: Analyze a data set for gene expression stability with the...

In dhammarstrom/generefer: Functions for finding stable reference genes in qPCR-experiments

Analyze a data set for gene expression stability with the NormFinder algorithm

Description

Analyze a data set for gene expression stability with the NormFinder algorithm

Usage

tidy_normfinder(data, group = TRUE, sample = "sample", gene = "gene",
  groups = "group", expression = "expression", log = FALSE)

Arguments

data	A data frame with sample, gene and group (optional) identifier and expression values. Expression values can be raw Cq or on linear scale.
group	Logical, if TRUE, the function will consider a grouping variable
sample	Character Column name for the sample identifiers
gene	Character Column name of the gene identifiers
groups	Character Column name of the group identifiers
expression	Character Name of column containing expression values
log	Logical if TRUE the function will consider expression values to be on a log scale

dhammarstrom/generefer documentation built on April 28, 2024, 6:40 a.m.