check_problems: Check problems in output of 'clean_metadata()'

In dhope/ARUtools: Tools for management of Acoustic Recording Unit (ARU) data

Check problems in output of 'clean_metadata()'

Description

Cleaning metadata can take a series of tries. This function helps summarize and explore missing metadata (problems).

Usage

check_problems(
  df,
  check = c("site_id", "aru_id", "date", "date_time", "longitude", "latitude"),
  path = FALSE,
  date = FALSE
)

Arguments

df	Data frame. Either meta data ('clean_metadata()') or GPS coordinates ('clean_gps()')
check	Character. Character vector of columns to check for missing values. Default is 'site_id', 'aru_id', 'date', 'date_time', 'longitude' and 'latitude'.
path	Logical. Whether to return just the file paths which have missing attributes. Default 'FALSE'
date	Logical. Whether to summarize output by date (as well as 'site_id' and 'aru_id'. Default 'FALSE'.

Value

A data frame summarizing the metadata by site_id, aru_type, aru_id, and (optionally) by date. Presents the number of files, directories, and days worth of recordings, as well as the minimum and maximum recording times.

Examples

m <- clean_metadata(project_files = example_files, pattern_aru_id = "test")

check_problems(m)
check_problems(m, date = TRUE)
check_problems(m, path = TRUE)

dhope/ARUtools documentation built on Jan. 18, 2024, 5:47 a.m.