Man pages for diogocamacho/rpegeos
Pathway enrichment for gene expression signatures
| cosine_similarity | Vector cosine similarity |
| crossprod_matrix | Cross-product matrix for tf-idf |
| enrich_geneset | rPEGEOS wrapper |
| enrichment_results | Results data frame |
| geneset_selection | Select gene set source. |
| pathway_genes | Genes in pathway |
| pathway_sets | Pathway sets |
| plot_enrichment | Plotting tf-idf enrichments |
| random_probability | Random probability |
| tfidf | TF-IDF matrix |
| user_inputs | User inputs |
