enrichment_results: Results data frame

In diogocamacho/rpegeos: Pathway enrichment for gene expression signatures

Description

This function returns a tidy data frame with all the enrichment results.

Usage

enrichment_results(query_similarities, random_probability, gene_counts,
  gene_names, pathway_names)

Arguments

query_similarities	Similarity score for query vector
random_probability	Probability of a given enrichment being random
gene_counts	Number of genes as described in pathway_genes
pathway_names	Pathway names for pathway set, correspond to the rows of the tf-idf matrix.

Value

Returns the enrichment results for each pathway given the query set.

diogocamacho/rpegeos documentation built on June 4, 2019, 6:37 p.m.