dynamics: Numerical Integration

In dkneis/rodeo: A Code Generator for ODE-Based Models

Numerical Integration

Description

Compute a dynamic solution with the numerical algorithms from package deSolve.

Arguments

times	Times of interest (numeric vector).
fortran	Switch between compiled Fortran and R code (logical). Default is TRUE.
proNames	Assign names to output columns holding the process rates? Default is TRUE.
...	Auxiliary arguments passed to ode. See notes below.

Value

The matrix returned by the integrator (see ode).

Note

This method can only be used after compile has been called.

The ... argument should not be used to assign values to any of y, parms, times, func. If fortran is TRUE it should also not assign values to dllname, nout, or outnames. All these arguments of ode get their appropriate values automatically.

Author(s)

[e-mail]

See Also

Use step for integration over a single time step with a built-in, Fortran-based solver.

dkneis/rodeo documentation built on Jan. 4, 2024, 2:18 p.m.