doPlots1: do Plots

In dlill/conveniencefunctions: Convenience Functions

do Plots

Description

do Plots

Usage

doPlots1(
  model,
  pngname = "plots%03d.png",
  height = 1000,
  width = 1200,
  FLAGdev.off = TRUE,
  tol = 1,
  FLAG_waterfalls = TRUE,
  FLAG_plotPars = TRUE,
  FLAG_scatterall_step1 = FALSE,
  FLAG_iterations = TRUE,
  nm = NULL,
  FLAG_predictions_conds_states_observables = TRUE,
  FLAG_predictions_states_conds = TRUE,
  FLAG_predictions_observables_conds = TRUE,
  FLAG_profiles = TRUE
)

Arguments

model	a dMod.frame .
pngname, height, width	as in png() .
FLAGdev.off	TRUE: shut down png device at the ende, FALSE: don't shut it down .
tol	for stepDetect in parframe .
FLAG_waterfalls	plotValues, subsetted to various chi2 value-thresholds .
FLAG_plotPars	plotPars of steps 1-3, 1-5 and the largest step .
FLAG_scatterall_step1	do a scatterplot of all parameters at step 1
FLAG_iterations	histogram of the number of iterations
nm	list with plotting helpers, such as a character vector of statenames or observables. their list entry must be called "states" and "observables"
FLAG_predictions_conds_states_observables	.
FLAG_predictions_states_conds	.
FLAG_predictions_observables_conds	.
FLAG_profiles	.

dlill/conveniencefunctions documentation built on Sept. 30, 2022, 4:40 a.m.