pe_L1_addL1ParsToExperimentalCondition: Add parameter columns to experimentalCondition

In dlill/petab: PEtab support for R

Add parameter columns to experimentalCondition

Description

Add parameter columns to experimentalCondition

Usage

pe_L1_addL1ParsToExperimentalCondition(
  pe,
  parameterId_base,
  conditionSpecL1_reference
)

Arguments

pe	petab with non-Null pe$experimentalCondition$L1Spec column which serves a) subsetting and b) creating parameter names
parameterId_base	parameterIds to be L1'd
conditionSpecL1_reference	Vector of entries referring to L1Spec which are deemed the base condition

Value

petab with updated experimentalCondition: L1Spec is removed, L1 parameter columns are added

Author(s)

Daniel Lill ([e-mail])

See Also

Other petab L1: L1_getParameterFormulaInjection(), pe_L1_createL1Problem(), pe_L1_updateParameterFormulaInjection()

Examples

pe <- petab_exampleRead("04")
pe$experimentalCondition$L1Spec <- pe$experimentalCondition$conditionId
pe_L1_addL1ParsToExperimentalCondition(pe, parameterId_base = c("kcat", "E"), conditionSpecL1_reference = "C1")

dlill/petab documentation built on Oct. 9, 2022, 3:07 p.m.