pe_L1_createL1Problem: From a petab, create a petab which encodes an L1 problem

In dlill/petab: PEtab support for R

From a petab, create a petab which encodes an L1 problem

Description

From a petab, create a petab which encodes an L1 problem

Usage

pe_L1_createL1Problem(
  pe,
  parameterId_base,
  conditionSpecL1_reference,
  j_conditionSpecL1 = conditionId
)

Arguments

pe	petab
parameterId_base	parameterIds to be L1'd
conditionSpecL1_reference	Vector of entries referring to L1Spec which are deemed the base condition
j_conditionSpecL1	data.table-j argument to create L1Spec within pe$experimentalCondition. E.g. conditionId (as symbol, will be substitute-eval'd)

Value

petab() with L1 parameters

Author(s)

Daniel Lill ([e-mail])

See Also

Other petab L1: L1_getParameterFormulaInjection(), pe_L1_addL1ParsToExperimentalCondition(), pe_L1_updateParameterFormulaInjection()

Examples

pe <- petab_exampleRead("04")
pe_L1_createL1Problem(pe, c("kcat", "E"), conditionSpecL1_reference = "C1", j_conditionSpecL1 = conditionId)

dlill/petab documentation built on Oct. 9, 2022, 3:07 p.m.