petab_metaInformation_getPatterns: Get "patterns" from metaInformation

In dlill/petab: PEtab support for R

Get "patterns" from metaInformation

Description

Get "patterns" from metaInformation

Usage

petab_metaInformation_getPatterns(mi)

Arguments

pe	pe with pe$meta$metaInformation

Value

list(column_name = "pattern")

Author(s)

Daniel Lill ([e-mail])

See Also

Other metaInformation: dco_expandPatterns()

Examples

# In two tables
mi <- yaml::read_yaml(text = "measurementData:\n  measurement:\n    unit: absolute_conc\n    lloq: ~\n  time:\n    unit: hours\n  replicateId:\n    pattern: experiment_replicate_technicalReplicate\nexperimentalCondition:\n  conditionId:\n    pattern: cellline_TGFb_Statin\n  TGFb:\n    unit: ng/ul\n  Statin:\n    unit: ug/ml\n")
petab_metaInformation_getPatterns(mi)

# In one table
mi <- yaml::read_yaml(text = "measurementData:\n  measurement:\n    unit: absolute_conc\n    lloq: ~\n  time:\n    unit: hours\n  experimentalCondition:\n  conditionId:\n    pattern: cellline_TGFb_Statin\n  TGFb:\n    unit: ng/ul\n  Statin:\n    unit: ug/ml\n")
petab_metaInformation_getPatterns(mi)

# No pattern
mi <- yaml::read_yaml(text = "measurementData:\n  measurement:\n    unit: absolute_conc")
petab_metaInformation_getPatterns(mi)

dlill/petab documentation built on Oct. 9, 2022, 3:07 p.m.