plotPEtabSBML: Plot observables and states of an SBML/PEtab model

In dlill/petab: PEtab support for R

Plot observables and states of an SBML/PEtab model

Description

This function plots data and fits of an SBML/PEtab model after the import. Note: Certain objects generated during the model import by importPEtabSBML have to be present in the global environment and are used as default variables if not specified differntly.

Usage

plotPEtabSBML(
  ...,
  g1 = g,
  x1 = x,
  p1 = p0,
  mydata1 = mydata,
  pouter1 = pouter,
  times1 = times,
  errfn = err
)

Arguments

...	further arguments going to plotCombined
g	observation function as obsfn
x	prediction function as prdfn
p	parameter function as parfn
mydata	data as datalist
pars	parameter as vector
times	times as vector

Author(s)

Marcus Rosenblatt and Svenja Kemmer

dlill/petab documentation built on Oct. 9, 2022, 3:07 p.m.