damselfish.lods: Sample LOD score data for simulated and real parent-child...
In dmkaplan2000/ConnMatTools: Tools for Working with Connectivity Data

Description Format Author(s) References See Also

This dataset contains both simulated and real 'log of the odds ratio' (LOD) scores for potential parent-child pairs of humbug damselfish (Dascyllus aruanus) from New Caledonia. Data was generated using FaMoz. In all cases, results are for the potential parent with the highest LOD score for a given larval fish (child). Simulated data is based on artificial children generated from either real potential parent-pairs (the 'in' group) or artificial parents generated from observed allelic frequencies (the 'out' group).

A list with 3 elements:

in.group: 5000 maximum LOD scores for simulated children from random crossing of real potential parents
out.group: 5000 maximum LOD scores for simulated children from random crossing of artificial potential parents based on observed allelic frequencies
real.children: Maximum LOD scores for 200 real juvenile fish

David M. Kaplan dmkaplan2000@gmail.com

Gerber S, Chabrier P, Kremer A (2003) FAMOZ: a software for parentage analysis using dominant, codominant and uniparentally inherited markers. Molecular Ecology Notes 3:479-481. doi:10.1046/j.1471-8286.2003.00439.x

Kaplan et al. (submitted) Uncertainty in marine larval connectivity estimation

See also d.rel.conn.dists.func

dmkaplan2000/ConnMatTools documentation built on Feb. 8, 2020, 4:41 p.m.