exploreACMT: Explore Acoustic and Midwater Trawl Data

In dmwarn/EchoNet2FishTO: Estimate Fish Abundance from Acoustic Echoes and Net Catch

Description

Explore acoustic and midwater trawl data.

Usage

exploreACMT(
  maindir,
  rdat = "ACMT",
  AC = TRUE,
  MT = TRUE,
  ageSp = NULL,
  short = TRUE,
  TSrange = c(-60, -27)
)

Arguments

maindir	A character scalar giving the directory where output will be placed. Use forward slashes, e.g., "C:/temp/".
rdat	A character scalar giving the name of the RData file in maindir with the acoustic and midwater trawl data, typically the output from readAll.
AC	A logical scalar indicating if you want to explore the acoustic data, default TRUE.
MT	A logical scalar indicating if you want to explore the midwater trawl data, default TRUE.
ageSp	A numeric vector giving the species codes for species for which age-length keys should be used, default NULL.
short	Logical scalar, indicating aspect of map area. If TRUE, the default, the mapped area is assumed to be wider (longitudinally) than tall. Used to better arrange multiple maps on a single page.
TSrange	A numeric vector of length 2, the target strength range of interest, minimum and maximum in dB, default c(-60, -30). Must be a whole number.

Details

A rich text file (rtf) with a *.doc file extension (so that it will be opened with Word by default) is saved to maindir.

dmwarn/EchoNet2FishTO documentation built on March 6, 2021, 12:25 a.m.