naive.simplicial.set.embedding: create an embedding of graph into a low-dimensional space

Description Usage Arguments Value

View source: R/umap_naive.R

Description

create an embedding of graph into a low-dimensional space

Usage

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naive.simplicial.set.embedding(g, embedding, config,
  fix.observations = NULL)

Arguments

g

matrix, graph connectivity as coo

embedding

matrix, coordinates for an initial graph embedding

config

list with settings

fix.observations

integer, number of points to avoid moving in optimization

Value

matrix with embedding, nrows is from g, ncols determined from config


donelsonsmith/umap_R documentation built on Nov. 4, 2019, 10:58 a.m.