README.md

In dongjunchung/pathclust: pathclust: Pathway-guided identification of cancer subgroups

pathclust

pathclust: Pathway-guided identification of cancer subtypes

pathclust is a statistical approach to improve prediction of cancer subgroups and identification of key genes and pathways by integrating information from biological pathway databases.

Installation

To install the development version of pathclust, it's easiest to use the 'devtools' package.

#install.packages("devtools")
library(devtools)
install_github("dongjunchung/pathclust")

Usage

The R package vignette will provide a good start point for the genetic analysis using pathclust package, including the overview of pathclust package and the example command lines:

library(pathclust)
vignette("pathclust-example")

dongjunchung/pathclust documentation built on May 30, 2019, 9:42 p.m.