Man pages for dongjunchung/pathclust
pathclust: Pathway-guided identification of cancer subgroups
| coef-FitGene-method | SPLS coefficient estimates for genes |
| coef-FitPath-method | LASSO coefficient estimates for pathways |
| FitGene-class | An S4 class to represent gene-level analysis results |
| FitPath-class | An S4 class for pathway-level analysis results |
| prefilter | prefilter function |
| Prefiltered-class | An S4 class to represent pre-filtered data. |
| selectGene-methods | Gene selection using SPLS model |
| selectPath-methods | pathway selection using LASSO |
| show-FitGene-method | Summary of selectGene results |
| show-FitPath-method | Summary of selectPath results |
| show-Prefiltered-method | Prefiltering summary |
| TCGA | TCGA data |
