hg38_cyto: A GenomicRanges object containing centromeric, gvar, and...
In dozmorovlab/multHiCcompare: Normalize and detect differences between Hi-C datasets when replicates of each experimental condition are available
hg38_cyto R Documentation
A GenomicRanges object containing centromeric, gvar, and stalk regions.
Description
A GRanges object with 2 metadata columns and 70 rows.
These ranges indicate the locations of centromeres,
stalks, and gvar regions from hg38.
Use this for filtering out these regions from
your data.
Usage
hg38_cyto
Format
An object of class GRanges of length 70.
Value
A GRanges object
Source
Data from UCSC
http://hgdownload.cse.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz
dozmorovlab/multHiCcompare documentation built on April 30, 2022, 3:02 p.m.
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| hg38_cyto | R Documentation |
A GenomicRanges object containing centromeric, gvar, and stalk regions.
Description
A GRanges object with 2 metadata columns and 70 rows. These ranges indicate the locations of centromeres, stalks, and gvar regions from hg38. Use this for filtering out these regions from your data.
Usage
hg38_cyto
Format
An object of class GRanges of length 70.
Value
A GRanges object
Source
Data from UCSC http://hgdownload.cse.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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