netEffectMatrixCalc: Generate the net effect matrix for the SLCDP.

In dp3ll1n/SLCDP: Simulation and inference of cell differentiation process governed by logistic growth dynamics

Description

Generate the r x ncell net effect matrix describing the change in cell counts induces by each of the r possible cellular events. The first ncell rows correspond to duplication events (+1 in process state), followed by ncell death events (-1) and all possible differentiation (-1;+1 respectively for the cell type of origin and destination). (). , the ODE formulas describing the first and second-order moments evolution for a SLCDP with ncell cell types.

Usage

netEffectMatrixCalc(ncell)

Arguments

ncell

The number of cell types over which the process evolves.

Value

r x ncell matrix.

Examples

netEffectMatrixCalc(5)

dp3ll1n/SLCDP documentation built on Feb. 6, 2021, 9:17 p.m.